Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 TSSK5P-201ENST00000423978 907 ntBASIC19.16■□□□□ 0.66
APPP05067 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.16■□□□□ 0.66
APPP05067 BCRP1-201ENST00000444246 691 ntBASIC19.16■□□□□ 0.66
APPP05067 SERBP1P3-201ENST00000459980 809 ntBASIC19.16■□□□□ 0.66
APPP05067 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APPP05067 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.16■□□□□ 0.66
APPP05067 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.16■□□□□ 0.66
APPP05067 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
APPP05067 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APPP05067 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
APPP05067 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
APPP05067 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APPP05067 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APPP05067 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APPP05067 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APPP05067 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
APPP05067 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.15■□□□□ 0.66
APPP05067 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.15■□□□□ 0.66
APPP05067 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
APPP05067 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
APPP05067 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
APPP05067 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.15■□□□□ 0.66
APPP05067 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APPP05067 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.15■□□□□ 0.66
APPP05067 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
APPP05067 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
APPP05067 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
APPP05067 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
APPP05067 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APPP05067 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APPP05067 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.15■□□□□ 0.66
APPP05067 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
APPP05067 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.15■□□□□ 0.66
APPP05067 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.15■□□□□ 0.66
APPP05067 RN7SL618P-201ENST00000477850 296 ntBASIC19.15■□□□□ 0.66
APPP05067 AC004890.2-204ENST00000481968 304 ntBASIC19.15■□□□□ 0.66
APPP05067 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.15■□□□□ 0.66
APPP05067 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.15■□□□□ 0.66
APPP05067 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.15■□□□□ 0.66
APPP05067 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
APPP05067 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.15■□□□□ 0.66
APPP05067 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.15■□□□□ 0.66
APPP05067 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
APPP05067 MIR6069-201ENST00000620069 79 ntBASIC19.15■□□□□ 0.66
APPP05067 AL033527.5-202ENST00000641632 1098 ntBASIC19.15■□□□□ 0.66
APPP05067 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
APPP05067 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APPP05067 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APPP05067 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
APPP05067 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
APPP05067 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APPP05067 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APPP05067 AL162727.3-201ENST00000635661 2787 ntBASIC19.15■□□□□ 0.66
APPP05067 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APPP05067 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APPP05067 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APPP05067 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.14■□□□□ 0.66
APPP05067 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
APPP05067 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
APPP05067 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.14■□□□□ 0.66
APPP05067 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APPP05067 C8orf49-201ENST00000525043 1968 ntBASIC19.14■□□□□ 0.65
APPP05067 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APPP05067 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APPP05067 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APPP05067 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
APPP05067 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
APPP05067 UGT1A2P-201ENST00000454886 866 ntBASIC19.14■□□□□ 0.65
APPP05067 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APPP05067 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
APPP05067 AL512361.1-201ENST00000554200 418 ntBASIC19.14■□□□□ 0.65
APPP05067 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.14■□□□□ 0.65
APPP05067 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.14■□□□□ 0.65
APPP05067 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
APPP05067 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
APPP05067 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APPP05067 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APPP05067 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APPP05067 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
APPP05067 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
APPP05067 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
APPP05067 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.14■□□□□ 0.65
APPP05067 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APPP05067 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.14■□□□□ 0.65
APPP05067 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
APPP05067 AC010491.1-201ENST00000563101 2797 ntBASIC19.14■□□□□ 0.65
APPP05067 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.13■□□□□ 0.65
APPP05067 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
APPP05067 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
APPP05067 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
APPP05067 CICP6-201ENST00000457191 2729 ntBASIC19.13■□□□□ 0.65
APPP05067 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APPP05067 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
APPP05067 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
APPP05067 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.13■□□□□ 0.65
APPP05067 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
APPP05067 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.13■□□□□ 0.65
APPP05067 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.13■□□□□ 0.65
APPP05067 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.13■□□□□ 0.65
APPP05067 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms