Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VTNP04004 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
VTNP04004 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTNP04004 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
VTNP04004 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTNP04004 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.39■□□□□ 0.37
VTNP04004 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTNP04004 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
VTNP04004 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTNP04004 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.39■□□□□ 0.37
VTNP04004 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTNP04004 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.38■□□□□ 0.37
VTNP04004 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VTNP04004 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
VTNP04004 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VTNP04004 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VTNP04004 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VTNP04004 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
VTNP04004 MTHFR-217ENST00000641820 1569 ntBASIC17.38■□□□□ 0.37
VTNP04004 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VTNP04004 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VTNP04004 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VTNP04004 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VTNP04004 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VTNP04004 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
VTNP04004 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VTNP04004 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.38■□□□□ 0.37
VTNP04004 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VTNP04004 ACA64.2-201ENST00000459014 129 ntBASIC17.38■□□□□ 0.37
VTNP04004 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.38■□□□□ 0.37
VTNP04004 AC008735.3-201ENST00000596646 500 ntBASIC17.38■□□□□ 0.37
VTNP04004 AC010319.3-201ENST00000597028 470 ntBASIC17.38■□□□□ 0.37
VTNP04004 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.38■□□□□ 0.37
VTNP04004 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VTNP04004 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
VTNP04004 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VTNP04004 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VTNP04004 LINC02199-201ENST00000506655 2702 ntBASIC17.38■□□□□ 0.37
VTNP04004 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VTNP04004 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.38■□□□□ 0.37
VTNP04004 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.38■□□□□ 0.37
VTNP04004 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VTNP04004 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
VTNP04004 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VTNP04004 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VTNP04004 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.37■□□□□ 0.37
VTNP04004 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
VTNP04004 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.37■□□□□ 0.37
VTNP04004 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.37■□□□□ 0.37
VTNP04004 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.37■□□□□ 0.37
VTNP04004 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
VTNP04004 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VTNP04004 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.37■□□□□ 0.37
VTNP04004 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VTNP04004 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.37■□□□□ 0.37
VTNP04004 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VTNP04004 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VTNP04004 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
VTNP04004 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VTNP04004 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VTNP04004 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VTNP04004 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
VTNP04004 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VTNP04004 AL442647.2-201ENST00000429864 857 ntBASIC17.37■□□□□ 0.37
VTNP04004 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
VTNP04004 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.37■□□□□ 0.37
VTNP04004 RAB43P1-201ENST00000561790 589 ntBASIC17.37■□□□□ 0.37
VTNP04004 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.37■□□□□ 0.37
VTNP04004 AL359711.2-201ENST00000563105 872 ntBASIC17.37■□□□□ 0.37
VTNP04004 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.37■□□□□ 0.37
VTNP04004 BRI3BPP1-201ENST00000594224 787 ntBASIC17.37■□□□□ 0.37
VTNP04004 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
VTNP04004 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VTNP04004 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.37■□□□□ 0.37
VTNP04004 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
VTNP04004 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VTNP04004 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VTNP04004 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VTNP04004 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
VTNP04004 AC011477.6-201ENST00000604980 1927 ntBASIC17.37■□□□□ 0.37
VTNP04004 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VTNP04004 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.37■□□□□ 0.37
VTNP04004 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VTNP04004 AC006449.5-201ENST00000610658 2098 ntBASIC17.36■□□□□ 0.37
VTNP04004 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.36■□□□□ 0.37
VTNP04004 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VTNP04004 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VTNP04004 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VTNP04004 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VTNP04004 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VTNP04004 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VTNP04004 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VTNP04004 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
VTNP04004 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
VTNP04004 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.36■□□□□ 0.37
VTNP04004 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.36■□□□□ 0.37
VTNP04004 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.36■□□□□ 0.37
VTNP04004 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.36■□□□□ 0.37
VTNP04004 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.36■□□□□ 0.37
VTNP04004 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms