Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SIX6O95475 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SIX6O95475 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
SIX6O95475 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SIX6O95475 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SIX6O95475 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
SIX6O95475 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SIX6O95475 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SIX6O95475 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SIX6O95475 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SIX6O95475 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SIX6O95475 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SIX6O95475 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SIX6O95475 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
SIX6O95475 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.41□□□□□ -0.26
SIX6O95475 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SIX6O95475 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SIX6O95475 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SIX6O95475 CICP17-201ENST00000418553 2377 ntBASIC13.41□□□□□ -0.26
SIX6O95475 PRORSD1P-201ENST00000295112 541 ntBASIC13.41□□□□□ -0.26
SIX6O95475 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SIX6O95475 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SIX6O95475 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.41□□□□□ -0.26
SIX6O95475 PMS2P1-201ENST00000431037 1228 ntBASIC13.41□□□□□ -0.26
SIX6O95475 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.41□□□□□ -0.26
SIX6O95475 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.41□□□□□ -0.26
SIX6O95475 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC13.41□□□□□ -0.26
SIX6O95475 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.41□□□□□ -0.26
SIX6O95475 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SIX6O95475 ITM2C-210ENST00000620962 501 ntBASIC13.41□□□□□ -0.26
SIX6O95475 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
SIX6O95475 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.41□□□□□ -0.26
SIX6O95475 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SIX6O95475 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.41□□□□□ -0.26
SIX6O95475 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.41□□□□□ -0.26
SIX6O95475 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.41□□□□□ -0.26
SIX6O95475 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SIX6O95475 AC067750.1-201ENST00000608826 6545 ntBASIC13.41□□□□□ -0.26
SIX6O95475 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SIX6O95475 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SIX6O95475 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.41□□□□□ -0.26
SIX6O95475 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
SIX6O95475 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SIX6O95475 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.41□□□□□ -0.26
SIX6O95475 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SIX6O95475 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SIX6O95475 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.41□□□□□ -0.26
SIX6O95475 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.4□□□□□ -0.26
SIX6O95475 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SIX6O95475 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.4□□□□□ -0.26
SIX6O95475 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SIX6O95475 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.4□□□□□ -0.26
SIX6O95475 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SIX6O95475 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SIX6O95475 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SIX6O95475 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.4□□□□□ -0.26
SIX6O95475 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SIX6O95475 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SIX6O95475 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SIX6O95475 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
SIX6O95475 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SIX6O95475 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.4□□□□□ -0.26
SIX6O95475 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SIX6O95475 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SIX6O95475 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.4□□□□□ -0.26
SIX6O95475 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SIX6O95475 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.4□□□□□ -0.26
SIX6O95475 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
SIX6O95475 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SIX6O95475 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SIX6O95475 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SIX6O95475 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SIX6O95475 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SIX6O95475 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.4□□□□□ -0.26
SIX6O95475 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
SIX6O95475 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SIX6O95475 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SIX6O95475 HAUS4P1-201ENST00000406739 1145 ntBASIC13.4□□□□□ -0.26
SIX6O95475 SPDYE21P-201ENST00000413323 827 ntBASIC13.4□□□□□ -0.26
SIX6O95475 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SIX6O95475 TSPY15P-201ENST00000457163 923 ntBASIC13.4□□□□□ -0.26
SIX6O95475 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SIX6O95475 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.4□□□□□ -0.26
SIX6O95475 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC13.4□□□□□ -0.26
SIX6O95475 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.4□□□□□ -0.26
SIX6O95475 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
SIX6O95475 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.4□□□□□ -0.26
SIX6O95475 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SIX6O95475 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.4□□□□□ -0.26
SIX6O95475 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.4□□□□□ -0.26
SIX6O95475 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SIX6O95475 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
SIX6O95475 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SIX6O95475 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.4□□□□□ -0.26
SIX6O95475 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.4□□□□□ -0.26
SIX6O95475 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SIX6O95475 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
SIX6O95475 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SIX6O95475 SLC22A20-204ENST00000530038 1673 ntBASIC13.4□□□□□ -0.26
SIX6O95475 AL928921.2-201ENST00000641325 2442 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms