Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC13.89□□□□□ -0.19
CCNKO75909 Z99916.2-201ENST00000604037 246 ntBASIC13.89□□□□□ -0.19
CCNKO75909 PGM5P2-202ENST00000637225 1043 ntBASIC13.89□□□□□ -0.19
CCNKO75909 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCNKO75909 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCNKO75909 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCNKO75909 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.89□□□□□ -0.19
CCNKO75909 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCNKO75909 AC092135.3-201ENST00000624151 1846 ntBASIC13.89□□□□□ -0.19
CCNKO75909 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCNKO75909 LINC01144-201ENST00000626198 1710 ntBASIC13.89□□□□□ -0.19
CCNKO75909 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCNKO75909 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CCNKO75909 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCNKO75909 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CCNKO75909 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.89□□□□□ -0.19
CCNKO75909 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCNKO75909 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCNKO75909 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCNKO75909 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCNKO75909 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CCNKO75909 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.88□□□□□ -0.19
CCNKO75909 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.88□□□□□ -0.19
CCNKO75909 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.88□□□□□ -0.19
CCNKO75909 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
CCNKO75909 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.88□□□□□ -0.19
CCNKO75909 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
CCNKO75909 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 TSPY7P-201ENST00000431358 1114 ntBASIC13.88□□□□□ -0.19
CCNKO75909 UBE2SP1-201ENST00000450587 669 ntBASIC13.88□□□□□ -0.19
CCNKO75909 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.88□□□□□ -0.19
CCNKO75909 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC13.88□□□□□ -0.19
CCNKO75909 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.88□□□□□ -0.19
CCNKO75909 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13.88□□□□□ -0.19
CCNKO75909 TEN1-204ENST00000588202 862 ntTSL 3 BASIC13.88□□□□□ -0.19
CCNKO75909 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.88□□□□□ -0.19
CCNKO75909 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 PCGF3-213ENST00000620529 1899 ntBASIC13.88□□□□□ -0.19
CCNKO75909 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.88□□□□□ -0.19
CCNKO75909 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
CCNKO75909 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CCNKO75909 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.88□□□□□ -0.19
CCNKO75909 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CCNKO75909 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.88□□□□□ -0.19
CCNKO75909 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.88□□□□□ -0.19
CCNKO75909 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CCNKO75909 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CCNKO75909 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCNKO75909 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCNKO75909 AL512652.2-201ENST00000625156 1716 ntBASIC13.87□□□□□ -0.19
CCNKO75909 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CCNKO75909 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCNKO75909 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCNKO75909 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CCNKO75909 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCNKO75909 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.87□□□□□ -0.19
CCNKO75909 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCNKO75909 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCNKO75909 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCNKO75909 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCNKO75909 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCNKO75909 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
CCNKO75909 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCNKO75909 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCNKO75909 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCNKO75909 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCNKO75909 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCNKO75909 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CCNKO75909 TSPY12P-201ENST00000421279 868 ntBASIC13.87□□□□□ -0.19
CCNKO75909 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.87□□□□□ -0.19
CCNKO75909 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCNKO75909 FAM201B-201ENST00000458407 597 ntBASIC13.87□□□□□ -0.19
CCNKO75909 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCNKO75909 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCNKO75909 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.87□□□□□ -0.19
CCNKO75909 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.87□□□□□ -0.19
CCNKO75909 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms