Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CUBNO60494 AL592424.1-201ENST00000563624 1536 ntBASIC12.55□□□□□ -0.4
CUBNO60494 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CUBNO60494 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.55□□□□□ -0.4
CUBNO60494 AL023775.1-201ENST00000454907 1746 ntBASIC12.55□□□□□ -0.4
CUBNO60494 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CUBNO60494 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CUBNO60494 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CUBNO60494 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CUBNO60494 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.55□□□□□ -0.4
CUBNO60494 AC000095.1-201ENST00000603208 874 ntBASIC12.55□□□□□ -0.4
CUBNO60494 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.55□□□□□ -0.4
CUBNO60494 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CUBNO60494 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CUBNO60494 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CUBNO60494 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.54□□□□□ -0.4
CUBNO60494 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CUBNO60494 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CUBNO60494 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CUBNO60494 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CUBNO60494 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC12.54□□□□□ -0.4
CUBNO60494 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC12.54□□□□□ -0.4
CUBNO60494 CNN2P10-201ENST00000443067 918 ntBASIC12.54□□□□□ -0.4
CUBNO60494 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
CUBNO60494 AC005730.2-201ENST00000564549 1184 ntBASIC12.54□□□□□ -0.4
CUBNO60494 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CUBNO60494 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CUBNO60494 AL354989.2-201ENST00000435838 1540 ntBASIC12.54□□□□□ -0.4
CUBNO60494 AC084018.2-201ENST00000613093 2607 ntBASIC12.54□□□□□ -0.4
CUBNO60494 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC12.54□□□□□ -0.4
CUBNO60494 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CUBNO60494 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CUBNO60494 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CUBNO60494 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CUBNO60494 BNIP3P1-202ENST00000550043 1585 ntBASIC12.54□□□□□ -0.4
CUBNO60494 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CUBNO60494 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CUBNO60494 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CUBNO60494 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CUBNO60494 MAGEA5-201ENST00000446757 942 ntBASIC12.54□□□□□ -0.4
CUBNO60494 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.54□□□□□ -0.4
CUBNO60494 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.54□□□□□ -0.4
CUBNO60494 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CUBNO60494 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CUBNO60494 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.54□□□□□ -0.4
CUBNO60494 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CUBNO60494 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC12.54□□□□□ -0.4
CUBNO60494 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CUBNO60494 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CUBNO60494 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CUBNO60494 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CUBNO60494 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CUBNO60494 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CUBNO60494 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CUBNO60494 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CUBNO60494 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
CUBNO60494 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.54□□□□□ -0.4
CUBNO60494 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.54□□□□□ -0.4
CUBNO60494 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC12.54□□□□□ -0.4
CUBNO60494 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CUBNO60494 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CUBNO60494 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CUBNO60494 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CUBNO60494 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CUBNO60494 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.53□□□□□ -0.4
CUBNO60494 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC12.53□□□□□ -0.4
CUBNO60494 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CUBNO60494 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CUBNO60494 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CUBNO60494 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CUBNO60494 AC004987.2-201ENST00000395959 1148 ntBASIC12.53□□□□□ -0.4
CUBNO60494 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.53□□□□□ -0.4
CUBNO60494 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.53□□□□□ -0.4
CUBNO60494 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC12.53□□□□□ -0.4
CUBNO60494 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CUBNO60494 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.53□□□□□ -0.4
CUBNO60494 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.53□□□□□ -0.4
CUBNO60494 MIR4750-201ENST00000584564 56 ntBASIC12.53□□□□□ -0.4
CUBNO60494 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.53□□□□□ -0.4
CUBNO60494 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CUBNO60494 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CUBNO60494 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CUBNO60494 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CUBNO60494 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CUBNO60494 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CUBNO60494 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CUBNO60494 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.53□□□□□ -0.4
CUBNO60494 CU633904.3-201ENST00000624042 1029 ntBASIC12.53□□□□□ -0.4
CUBNO60494 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC12.53□□□□□ -0.4
CUBNO60494 AC011491.1-203ENST00000637688 543 ntBASIC12.53□□□□□ -0.4
CUBNO60494 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.53□□□□□ -0.4
CUBNO60494 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CUBNO60494 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CUBNO60494 AL121723.1-201ENST00000445194 1519 ntBASIC12.53□□□□□ -0.4
CUBNO60494 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CUBNO60494 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CUBNO60494 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CUBNO60494 ALOX12P2-203ENST00000570921 1945 ntBASIC12.53□□□□□ -0.4
CUBNO60494 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CUBNO60494 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms