Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.43□□□□□ -0.42
PDE6DO43924 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PDE6DO43924 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
PDE6DO43924 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.43□□□□□ -0.42
PDE6DO43924 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.43□□□□□ -0.42
PDE6DO43924 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.43□□□□□ -0.42
PDE6DO43924 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6DO43924 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
PDE6DO43924 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6DO43924 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.42□□□□□ -0.42
PDE6DO43924 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.42□□□□□ -0.42
PDE6DO43924 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6DO43924 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.42□□□□□ -0.42
PDE6DO43924 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6DO43924 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6DO43924 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6DO43924 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.42□□□□□ -0.42
PDE6DO43924 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6DO43924 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
PDE6DO43924 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6DO43924 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6DO43924 BAALC-201ENST00000297574 801 ntTSL 3 BASIC12.42□□□□□ -0.42
PDE6DO43924 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6DO43924 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC12.42□□□□□ -0.42
PDE6DO43924 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC12.42□□□□□ -0.42
PDE6DO43924 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC12.42□□□□□ -0.42
PDE6DO43924 AC112907.2-201ENST00000448639 330 ntBASIC12.42□□□□□ -0.42
PDE6DO43924 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
PDE6DO43924 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.42□□□□□ -0.42
PDE6DO43924 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC12.42□□□□□ -0.42
PDE6DO43924 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.42□□□□□ -0.42
PDE6DO43924 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.42□□□□□ -0.42
PDE6DO43924 CYB561-217ENST00000582997 877 ntTSL 5 BASIC12.42□□□□□ -0.42
PDE6DO43924 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC12.42□□□□□ -0.42
PDE6DO43924 AF228730.7-201ENST00000641842 219 ntBASIC12.42□□□□□ -0.42
PDE6DO43924 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
PDE6DO43924 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
PDE6DO43924 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6DO43924 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6DO43924 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.42□□□□□ -0.42
PDE6DO43924 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.42□□□□□ -0.42
PDE6DO43924 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.42□□□□□ -0.42
PDE6DO43924 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6DO43924 AC006504.5-208ENST00000588784 2401 ntBASIC12.42□□□□□ -0.42
PDE6DO43924 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6DO43924 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6DO43924 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6DO43924 CICP14-201ENST00000629111 2732 ntBASIC12.42□□□□□ -0.42
PDE6DO43924 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6DO43924 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6DO43924 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6DO43924 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
PDE6DO43924 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
PDE6DO43924 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.42□□□□□ -0.42
PDE6DO43924 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
PDE6DO43924 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
PDE6DO43924 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.41□□□□□ -0.42
PDE6DO43924 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.41□□□□□ -0.42
PDE6DO43924 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.41□□□□□ -0.42
PDE6DO43924 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
PDE6DO43924 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
PDE6DO43924 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
PDE6DO43924 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
PDE6DO43924 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
PDE6DO43924 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.41□□□□□ -0.42
PDE6DO43924 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 WASH6P-202ENST00000359512 1437 ntBASIC12.41□□□□□ -0.42
PDE6DO43924 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.41□□□□□ -0.42
PDE6DO43924 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC12.41□□□□□ -0.42
PDE6DO43924 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC12.41□□□□□ -0.42
PDE6DO43924 AC087163.2-201ENST00000457299 853 ntBASIC12.41□□□□□ -0.42
PDE6DO43924 YBX1P2-201ENST00000489612 999 ntBASIC12.41□□□□□ -0.42
PDE6DO43924 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
PDE6DO43924 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12.41□□□□□ -0.42
PDE6DO43924 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC12.41□□□□□ -0.42
PDE6DO43924 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
PDE6DO43924 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms