Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE3O43900 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PRICKLE3O43900 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.28■□□□□ 0.04
PRICKLE3O43900 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE3O43900 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE3O43900 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PRICKLE3O43900 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.28■□□□□ 0.04
PRICKLE3O43900 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE3O43900 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE3O43900 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.28■□□□□ 0.04
PRICKLE3O43900 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PRICKLE3O43900 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
PRICKLE3O43900 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PRICKLE3O43900 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE3O43900 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.28■□□□□ 0.04
PRICKLE3O43900 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE3O43900 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.28■□□□□ 0.04
PRICKLE3O43900 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.28■□□□□ 0.04
PRICKLE3O43900 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE3O43900 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.28■□□□□ 0.04
PRICKLE3O43900 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.28■□□□□ 0.04
PRICKLE3O43900 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE3O43900 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE3O43900 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE3O43900 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.28■□□□□ 0.04
PRICKLE3O43900 AC092337.1-201ENST00000568699 1129 ntBASIC15.28■□□□□ 0.04
PRICKLE3O43900 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.28■□□□□ 0.04
PRICKLE3O43900 RN7SL204P-201ENST00000582831 262 ntBASIC15.28■□□□□ 0.04
PRICKLE3O43900 LINC01115-203ENST00000606068 577 ntBASIC15.28■□□□□ 0.04
PRICKLE3O43900 AC004790.1-201ENST00000612686 536 ntBASIC15.28■□□□□ 0.04
PRICKLE3O43900 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE3O43900 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.28■□□□□ 0.04
PRICKLE3O43900 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.28■□□□□ 0.04
PRICKLE3O43900 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE3O43900 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
PRICKLE3O43900 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PRICKLE3O43900 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
PRICKLE3O43900 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE3O43900 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE3O43900 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE3O43900 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRICKLE3O43900 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.28■□□□□ 0.04
PRICKLE3O43900 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PRICKLE3O43900 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.27■□□□□ 0.04
PRICKLE3O43900 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRICKLE3O43900 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRICKLE3O43900 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRICKLE3O43900 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PRICKLE3O43900 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRICKLE3O43900 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.27■□□□□ 0.04
PRICKLE3O43900 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRICKLE3O43900 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRICKLE3O43900 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRICKLE3O43900 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.27■□□□□ 0.04
PRICKLE3O43900 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.27■□□□□ 0.04
PRICKLE3O43900 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRICKLE3O43900 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRICKLE3O43900 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRICKLE3O43900 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PRICKLE3O43900 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.27■□□□□ 0.04
PRICKLE3O43900 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRICKLE3O43900 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.27■□□□□ 0.04
PRICKLE3O43900 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRICKLE3O43900 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PRICKLE3O43900 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PRICKLE3O43900 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.27■□□□□ 0.04
PRICKLE3O43900 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRICKLE3O43900 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRICKLE3O43900 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.27■□□□□ 0.04
PRICKLE3O43900 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.27■□□□□ 0.04
PRICKLE3O43900 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.27■□□□□ 0.04
PRICKLE3O43900 FAM207CP-201ENST00000443486 507 ntBASIC15.27■□□□□ 0.04
PRICKLE3O43900 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.27■□□□□ 0.04
PRICKLE3O43900 SPDYE18-201ENST00000510091 1050 ntBASIC15.27■□□□□ 0.04
PRICKLE3O43900 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.27■□□□□ 0.04
PRICKLE3O43900 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.27■□□□□ 0.04
PRICKLE3O43900 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PRICKLE3O43900 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.27■□□□□ 0.04
PRICKLE3O43900 AC135586.1-201ENST00000539323 574 ntBASIC15.27■□□□□ 0.04
PRICKLE3O43900 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.27■□□□□ 0.04
PRICKLE3O43900 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRICKLE3O43900 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRICKLE3O43900 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRICKLE3O43900 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRICKLE3O43900 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRICKLE3O43900 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PRICKLE3O43900 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRICKLE3O43900 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PRICKLE3O43900 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PRICKLE3O43900 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRICKLE3O43900 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PRICKLE3O43900 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRICKLE3O43900 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PRICKLE3O43900 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE3O43900 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.26■□□□□ 0.03
PRICKLE3O43900 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PRICKLE3O43900 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.26■□□□□ 0.03
PRICKLE3O43900 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE3O43900 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.26■□□□□ 0.03
PRICKLE3O43900 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms