Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HDAC3O15379 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HDAC3O15379 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HDAC3O15379 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HDAC3O15379 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HDAC3O15379 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
HDAC3O15379 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HDAC3O15379 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
HDAC3O15379 FLJ16779-201ENST00000612722 7638 ntBASIC15.56■□□□□ 0.08
HDAC3O15379 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HDAC3O15379 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HDAC3O15379 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HDAC3O15379 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HDAC3O15379 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HDAC3O15379 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HDAC3O15379 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.56■□□□□ 0.08
HDAC3O15379 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
HDAC3O15379 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
HDAC3O15379 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.56■□□□□ 0.08
HDAC3O15379 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HDAC3O15379 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
HDAC3O15379 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HDAC3O15379 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HDAC3O15379 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HDAC3O15379 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HDAC3O15379 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.56■□□□□ 0.08
HDAC3O15379 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HDAC3O15379 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.56■□□□□ 0.08
HDAC3O15379 IGLL3P-201ENST00000412472 434 ntBASIC15.56■□□□□ 0.08
HDAC3O15379 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.56■□□□□ 0.08
HDAC3O15379 AF186996.4-201ENST00000467186 377 ntBASIC15.56■□□□□ 0.08
HDAC3O15379 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.56■□□□□ 0.08
HDAC3O15379 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.56■□□□□ 0.08
HDAC3O15379 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.56■□□□□ 0.08
HDAC3O15379 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.56■□□□□ 0.08
HDAC3O15379 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.56■□□□□ 0.08
HDAC3O15379 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HDAC3O15379 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HDAC3O15379 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.56■□□□□ 0.08
HDAC3O15379 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.56■□□□□ 0.08
HDAC3O15379 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.56■□□□□ 0.08
HDAC3O15379 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HDAC3O15379 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HDAC3O15379 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HDAC3O15379 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.56■□□□□ 0.08
HDAC3O15379 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.56■□□□□ 0.08
HDAC3O15379 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HDAC3O15379 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.56■□□□□ 0.08
HDAC3O15379 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HDAC3O15379 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HDAC3O15379 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HDAC3O15379 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HDAC3O15379 AC018892.3-201ENST00000623986 2499 ntBASIC15.56■□□□□ 0.08
HDAC3O15379 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HDAC3O15379 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.56■□□□□ 0.08
HDAC3O15379 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
HDAC3O15379 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HDAC3O15379 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
HDAC3O15379 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HDAC3O15379 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.55■□□□□ 0.08
HDAC3O15379 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HDAC3O15379 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HDAC3O15379 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HDAC3O15379 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HDAC3O15379 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HDAC3O15379 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HDAC3O15379 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
HDAC3O15379 AC127383.1-201ENST00000444697 1800 ntBASIC15.55■□□□□ 0.08
HDAC3O15379 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HDAC3O15379 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
HDAC3O15379 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.55■□□□□ 0.08
HDAC3O15379 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
HDAC3O15379 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HDAC3O15379 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.55■□□□□ 0.08
HDAC3O15379 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
HDAC3O15379 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HDAC3O15379 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HDAC3O15379 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HDAC3O15379 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HDAC3O15379 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HDAC3O15379 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HDAC3O15379 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HDAC3O15379 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HDAC3O15379 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HDAC3O15379 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.55■□□□□ 0.08
HDAC3O15379 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.55■□□□□ 0.08
HDAC3O15379 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.55■□□□□ 0.08
HDAC3O15379 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.55■□□□□ 0.08
HDAC3O15379 AC026396.1-201ENST00000419388 421 ntBASIC15.55■□□□□ 0.08
HDAC3O15379 KRT18P67-201ENST00000432816 1264 ntBASIC15.55■□□□□ 0.08
HDAC3O15379 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.55■□□□□ 0.08
HDAC3O15379 PRYP6-201ENST00000514804 343 ntBASIC15.55■□□□□ 0.08
HDAC3O15379 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.55■□□□□ 0.08
HDAC3O15379 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.55■□□□□ 0.08
HDAC3O15379 AC243562.2-201ENST00000561247 970 ntBASIC15.55■□□□□ 0.08
HDAC3O15379 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.55■□□□□ 0.08
HDAC3O15379 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
HDAC3O15379 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HDAC3O15379 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
HDAC3O15379 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms