Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN6O15212 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN6O15212 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PFDN6O15212 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PFDN6O15212 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN6O15212 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PFDN6O15212 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN6O15212 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN6O15212 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN6O15212 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
PFDN6O15212 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PFDN6O15212 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.06■□□□□ 0.16
PFDN6O15212 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN6O15212 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
PFDN6O15212 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN6O15212 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
PFDN6O15212 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN6O15212 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN6O15212 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN6O15212 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.05■□□□□ 0.16
PFDN6O15212 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN6O15212 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN6O15212 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.05■□□□□ 0.16
PFDN6O15212 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN6O15212 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN6O15212 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN6O15212 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PFDN6O15212 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
PFDN6O15212 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN6O15212 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.05■□□□□ 0.16
PFDN6O15212 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN6O15212 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN6O15212 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.05■□□□□ 0.16
PFDN6O15212 KRT8P48-201ENST00000515599 1220 ntBASIC16.05■□□□□ 0.16
PFDN6O15212 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.05■□□□□ 0.16
PFDN6O15212 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.05■□□□□ 0.16
PFDN6O15212 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.05■□□□□ 0.16
PFDN6O15212 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.05■□□□□ 0.16
PFDN6O15212 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.05■□□□□ 0.16
PFDN6O15212 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.05■□□□□ 0.16
PFDN6O15212 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.05■□□□□ 0.16
PFDN6O15212 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PFDN6O15212 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.05■□□□□ 0.16
PFDN6O15212 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN6O15212 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN6O15212 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PFDN6O15212 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN6O15212 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PFDN6O15212 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN6O15212 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.05■□□□□ 0.16
PFDN6O15212 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN6O15212 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.05■□□□□ 0.16
PFDN6O15212 TCAF2P1-201ENST00000291129 2421 ntBASIC16.05■□□□□ 0.16
PFDN6O15212 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
PFDN6O15212 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
PFDN6O15212 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN6O15212 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PFDN6O15212 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PFDN6O15212 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PFDN6O15212 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.04■□□□□ 0.16
PFDN6O15212 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN6O15212 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN6O15212 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.04■□□□□ 0.16
PFDN6O15212 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN6O15212 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.04■□□□□ 0.16
PFDN6O15212 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN6O15212 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.04■□□□□ 0.16
PFDN6O15212 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN6O15212 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN6O15212 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN6O15212 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.04■□□□□ 0.16
PFDN6O15212 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN6O15212 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PFDN6O15212 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN6O15212 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN6O15212 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN6O15212 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.04■□□□□ 0.16
PFDN6O15212 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN6O15212 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.04■□□□□ 0.16
PFDN6O15212 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.04■□□□□ 0.16
PFDN6O15212 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.04■□□□□ 0.16
PFDN6O15212 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.04■□□□□ 0.16
PFDN6O15212 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PFDN6O15212 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.04■□□□□ 0.16
PFDN6O15212 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.04■□□□□ 0.16
PFDN6O15212 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN6O15212 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN6O15212 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.04■□□□□ 0.16
PFDN6O15212 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.04■□□□□ 0.16
PFDN6O15212 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN6O15212 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN6O15212 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PFDN6O15212 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN6O15212 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.04■□□□□ 0.16
PFDN6O15212 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN6O15212 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PFDN6O15212 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PFDN6O15212 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.04■□□□□ 0.16
PFDN6O15212 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.04■□□□□ 0.16
PFDN6O15212 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms