Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEMA3EO15041 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SEMA3EO15041 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.06■□□□□ 0.64
SEMA3EO15041 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SEMA3EO15041 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEMA3EO15041 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SEMA3EO15041 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.05■□□□□ 0.64
SEMA3EO15041 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEMA3EO15041 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SEMA3EO15041 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEMA3EO15041 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEMA3EO15041 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEMA3EO15041 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEMA3EO15041 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
SEMA3EO15041 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC19.05■□□□□ 0.64
SEMA3EO15041 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SEMA3EO15041 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.05■□□□□ 0.64
SEMA3EO15041 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEMA3EO15041 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC19.05■□□□□ 0.64
SEMA3EO15041 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SEMA3EO15041 LINC02447-202ENST00000501888 2146 ntBASIC19.05■□□□□ 0.64
SEMA3EO15041 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC19.05■□□□□ 0.64
SEMA3EO15041 PIGL-212ENST00000581006 554 ntTSL 4 BASIC19.05■□□□□ 0.64
SEMA3EO15041 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC19.05■□□□□ 0.64
SEMA3EO15041 AL008721.1-201ENST00000609964 604 ntBASIC19.05■□□□□ 0.64
SEMA3EO15041 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEMA3EO15041 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEMA3EO15041 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEMA3EO15041 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEMA3EO15041 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEMA3EO15041 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SEMA3EO15041 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEMA3EO15041 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEMA3EO15041 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SEMA3EO15041 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEMA3EO15041 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC19.04■□□□□ 0.64
SEMA3EO15041 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEMA3EO15041 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SEMA3EO15041 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SEMA3EO15041 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SEMA3EO15041 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SEMA3EO15041 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
SEMA3EO15041 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SEMA3EO15041 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEMA3EO15041 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEMA3EO15041 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SEMA3EO15041 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEMA3EO15041 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SEMA3EO15041 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SEMA3EO15041 VDAC1P7-201ENST00000462417 847 ntBASIC19.04■□□□□ 0.64
SEMA3EO15041 USP32P1-208ENST00000506594 1164 ntBASIC19.04■□□□□ 0.64
SEMA3EO15041 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC19.04■□□□□ 0.64
SEMA3EO15041 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC19.04■□□□□ 0.64
SEMA3EO15041 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC19.04■□□□□ 0.64
SEMA3EO15041 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.04■□□□□ 0.64
SEMA3EO15041 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC19.04■□□□□ 0.64
SEMA3EO15041 MIR5189-201ENST00000577370 114 ntBASIC19.04■□□□□ 0.64
SEMA3EO15041 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC19.04■□□□□ 0.64
SEMA3EO15041 AC017083.2-201ENST00000608069 979 ntBASIC19.04■□□□□ 0.64
SEMA3EO15041 MIR6752-201ENST00000618442 71 ntBASIC19.04■□□□□ 0.64
SEMA3EO15041 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.04■□□□□ 0.64
SEMA3EO15041 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEMA3EO15041 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEMA3EO15041 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SEMA3EO15041 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.04■□□□□ 0.64
SEMA3EO15041 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEMA3EO15041 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.04■□□□□ 0.64
SEMA3EO15041 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEMA3EO15041 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SEMA3EO15041 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SEMA3EO15041 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SEMA3EO15041 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
SEMA3EO15041 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SEMA3EO15041 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.03■□□□□ 0.64
SEMA3EO15041 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.03■□□□□ 0.64
SEMA3EO15041 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEMA3EO15041 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
SEMA3EO15041 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC19.03■□□□□ 0.64
SEMA3EO15041 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SEMA3EO15041 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEMA3EO15041 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEMA3EO15041 PKD1P1-201ENST00000458669 6805 ntBASIC19.03■□□□□ 0.64
SEMA3EO15041 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SEMA3EO15041 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEMA3EO15041 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEMA3EO15041 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC19.03■□□□□ 0.64
SEMA3EO15041 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SEMA3EO15041 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.03■□□□□ 0.64
SEMA3EO15041 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEMA3EO15041 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEMA3EO15041 C1QBPP1-201ENST00000400117 770 ntBASIC19.03■□□□□ 0.64
SEMA3EO15041 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC19.03■□□□□ 0.64
SEMA3EO15041 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC19.03■□□□□ 0.64
SEMA3EO15041 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC19.03■□□□□ 0.64
SEMA3EO15041 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.03■□□□□ 0.64
SEMA3EO15041 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.03■□□□□ 0.64
SEMA3EO15041 AC026410.3-201ENST00000514280 936 ntBASIC19.03■□□□□ 0.64
SEMA3EO15041 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SEMA3EO15041 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.03■□□□□ 0.64
SEMA3EO15041 GPX4-206ENST00000588919 803 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms