Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
COLCA2A8K830 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.22□□□□□ -0.45
COLCA2A8K830 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
COLCA2A8K830 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.22□□□□□ -0.45
COLCA2A8K830 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
COLCA2A8K830 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.22□□□□□ -0.45
COLCA2A8K830 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
COLCA2A8K830 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
COLCA2A8K830 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
COLCA2A8K830 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
COLCA2A8K830 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
COLCA2A8K830 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
COLCA2A8K830 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
COLCA2A8K830 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC12.22□□□□□ -0.45
COLCA2A8K830 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
COLCA2A8K830 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
COLCA2A8K830 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.22□□□□□ -0.45
COLCA2A8K830 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
COLCA2A8K830 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
COLCA2A8K830 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.21□□□□□ -0.45
COLCA2A8K830 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
COLCA2A8K830 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
COLCA2A8K830 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
COLCA2A8K830 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
COLCA2A8K830 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
COLCA2A8K830 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
COLCA2A8K830 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
COLCA2A8K830 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
COLCA2A8K830 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
COLCA2A8K830 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
COLCA2A8K830 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
COLCA2A8K830 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
COLCA2A8K830 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
COLCA2A8K830 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
COLCA2A8K830 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
COLCA2A8K830 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
COLCA2A8K830 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
COLCA2A8K830 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
COLCA2A8K830 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
COLCA2A8K830 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
COLCA2A8K830 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.21□□□□□ -0.45
COLCA2A8K830 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
COLCA2A8K830 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
COLCA2A8K830 HAUS4P1-201ENST00000406739 1145 ntBASIC12.21□□□□□ -0.45
COLCA2A8K830 STK19B-204ENST00000512515 211 ntBASIC12.21□□□□□ -0.45
COLCA2A8K830 AF201337.1-201ENST00000520239 748 ntBASIC12.21□□□□□ -0.45
COLCA2A8K830 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC12.21□□□□□ -0.45
COLCA2A8K830 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC12.21□□□□□ -0.45
COLCA2A8K830 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC12.21□□□□□ -0.45
COLCA2A8K830 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC12.21□□□□□ -0.45
COLCA2A8K830 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
COLCA2A8K830 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
COLCA2A8K830 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
COLCA2A8K830 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.21□□□□□ -0.45
COLCA2A8K830 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
COLCA2A8K830 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.21□□□□□ -0.45
COLCA2A8K830 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.21□□□□□ -0.45
COLCA2A8K830 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
COLCA2A8K830 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
COLCA2A8K830 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
COLCA2A8K830 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
COLCA2A8K830 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.46
COLCA2A8K830 PCDHB18P-202ENST00000526308 3197 ntBASIC12.21□□□□□ -0.46
COLCA2A8K830 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.21□□□□□ -0.46
COLCA2A8K830 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC12.21□□□□□ -0.46
COLCA2A8K830 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.21□□□□□ -0.46
COLCA2A8K830 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.21□□□□□ -0.46
COLCA2A8K830 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
COLCA2A8K830 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
COLCA2A8K830 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
COLCA2A8K830 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.21□□□□□ -0.46
COLCA2A8K830 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
COLCA2A8K830 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.2□□□□□ -0.46
COLCA2A8K830 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.2□□□□□ -0.46
COLCA2A8K830 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.2□□□□□ -0.46
COLCA2A8K830 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.2□□□□□ -0.46
COLCA2A8K830 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
COLCA2A8K830 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
COLCA2A8K830 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
COLCA2A8K830 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
COLCA2A8K830 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
COLCA2A8K830 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
COLCA2A8K830 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
COLCA2A8K830 DNM1P41-201ENST00000623634 3350 ntBASIC12.2□□□□□ -0.46
COLCA2A8K830 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
COLCA2A8K830 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
COLCA2A8K830 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC12.2□□□□□ -0.46
COLCA2A8K830 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
COLCA2A8K830 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
COLCA2A8K830 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
COLCA2A8K830 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
COLCA2A8K830 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
COLCA2A8K830 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC12.2□□□□□ -0.46
COLCA2A8K830 AC016769.1-201ENST00000409132 1010 ntBASIC12.2□□□□□ -0.46
COLCA2A8K830 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
COLCA2A8K830 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
COLCA2A8K830 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC12.2□□□□□ -0.46
COLCA2A8K830 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC12.2□□□□□ -0.46
COLCA2A8K830 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
COLCA2A8K830 MIR3917-201ENST00000580971 93 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms