Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SRRM4A7MD48 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.87□□□□□ -0.35
SRRM4A7MD48 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRRM4A7MD48 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRRM4A7MD48 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRRM4A7MD48 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.87□□□□□ -0.35
SRRM4A7MD48 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SRRM4A7MD48 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRRM4A7MD48 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRRM4A7MD48 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SRRM4A7MD48 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.87□□□□□ -0.35
SRRM4A7MD48 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRRM4A7MD48 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRRM4A7MD48 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SRRM4A7MD48 HLA-H-201ENST00000383620 1096 ntBASIC12.87□□□□□ -0.35
SRRM4A7MD48 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SRRM4A7MD48 AC004987.2-201ENST00000395959 1148 ntBASIC12.87□□□□□ -0.35
SRRM4A7MD48 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.87□□□□□ -0.35
SRRM4A7MD48 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.87□□□□□ -0.35
SRRM4A7MD48 RPS8P6-201ENST00000426177 609 ntBASIC12.87□□□□□ -0.35
SRRM4A7MD48 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.87□□□□□ -0.35
SRRM4A7MD48 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.87□□□□□ -0.35
SRRM4A7MD48 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SRRM4A7MD48 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.87□□□□□ -0.35
SRRM4A7MD48 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.87□□□□□ -0.35
SRRM4A7MD48 MIR4313-201ENST00000580760 101 ntBASIC12.87□□□□□ -0.35
SRRM4A7MD48 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.87□□□□□ -0.35
SRRM4A7MD48 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.87□□□□□ -0.35
SRRM4A7MD48 AC105339.1-204ENST00000636249 355 ntBASIC12.87□□□□□ -0.35
SRRM4A7MD48 ELL2P1-201ENST00000413990 1906 ntBASIC12.87□□□□□ -0.35
SRRM4A7MD48 AC090616.6-203ENST00000579186 1945 ntBASIC12.87□□□□□ -0.35
SRRM4A7MD48 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SRRM4A7MD48 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRRM4A7MD48 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SRRM4A7MD48 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.87□□□□□ -0.35
SRRM4A7MD48 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRRM4A7MD48 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SRRM4A7MD48 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SRRM4A7MD48 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.87□□□□□ -0.35
SRRM4A7MD48 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.87□□□□□ -0.35
SRRM4A7MD48 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRRM4A7MD48 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SRRM4A7MD48 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SRRM4A7MD48 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.87□□□□□ -0.35
SRRM4A7MD48 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.87□□□□□ -0.35
SRRM4A7MD48 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SRRM4A7MD48 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRRM4A7MD48 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SRRM4A7MD48 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRRM4A7MD48 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRRM4A7MD48 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SRRM4A7MD48 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRRM4A7MD48 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRRM4A7MD48 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SRRM4A7MD48 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SRRM4A7MD48 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SRRM4A7MD48 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRRM4A7MD48 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRRM4A7MD48 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 CEND1P1-201ENST00000451006 455 ntBASIC12.86□□□□□ -0.35
SRRM4A7MD48 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRRM4A7MD48 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SRRM4A7MD48 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRRM4A7MD48 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRRM4A7MD48 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRRM4A7MD48 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SRRM4A7MD48 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SRRM4A7MD48 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 AC009090.5-201ENST00000624886 2285 ntBASIC12.86□□□□□ -0.35
SRRM4A7MD48 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRRM4A7MD48 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SRRM4A7MD48 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.86□□□□□ -0.35
SRRM4A7MD48 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SRRM4A7MD48 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SRRM4A7MD48 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SRRM4A7MD48 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms