Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRDV1A0A1B0GX56 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.08□□□□□ -0.16
TRDV1A0A1B0GX56 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 MTDHP3-201ENST00000594186 672 ntBASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TRDV1A0A1B0GX56 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 AC140479.7-201ENST00000636301 2332 ntBASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 AL645939.2-201ENST00000427340 991 ntBASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 AC006557.2-201ENST00000592985 1240 ntBASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRDV1A0A1B0GX56 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TRDV1A0A1B0GX56 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms