Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 AL513480.1-201ENST00000451731 511 ntBASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 CXCL1P1-201ENST00000502804 216 ntBASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 RNPS1P1-201ENST00000507437 918 ntBASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 AC073648.2-201ENST00000510116 352 ntBASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 AC105339.3-201ENST00000560043 636 ntBASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 PRELID1P1-202ENST00000567272 903 ntBASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 AC008735.5-201ENST00000623544 497 ntBASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 AC005593.1-201ENST00000624894 515 ntBASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 AC023908.3-201ENST00000564211 3047 ntBASIC12.46□□□□□ -0.41
TRAV5A0A0B4J249 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRAV5A0A0B4J249 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRAV5A0A0B4J249 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
TRAV5A0A0B4J249 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
TRAV5A0A0B4J249 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRAV5A0A0B4J249 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRAV5A0A0B4J249 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
TRAV5A0A0B4J249 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRAV5A0A0B4J249 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.46□□□□□ -0.42
TRAV5A0A0B4J249 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TRAV5A0A0B4J249 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TRAV5A0A0B4J249 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 AC012640.2-201ENST00000561606 901 ntBASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 AL031432.2-201ENST00000566714 459 ntBASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 AL928711.1-201ENST00000570165 459 ntBASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 LINC01711-201ENST00000598340 967 ntBASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
TRAV5A0A0B4J249 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms