Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AP001282.1-201ENST00000531301 1499 ntBASIC15.05■□□□□ -0
CCDC187A0A096LP49 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC187A0A096LP49 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.05■□□□□ -0
CCDC187A0A096LP49 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.05■□□□□ -0
CCDC187A0A096LP49 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.05■□□□□ -0
CCDC187A0A096LP49 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC187A0A096LP49 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCDC187A0A096LP49 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCDC187A0A096LP49 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CCDC187A0A096LP49 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCDC187A0A096LP49 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC187A0A096LP49 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CCDC187A0A096LP49 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCDC187A0A096LP49 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CCDC187A0A096LP49 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC187A0A096LP49 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC187A0A096LP49 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCDC187A0A096LP49 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC187A0A096LP49 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.04■□□□□ -0
CCDC187A0A096LP49 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC187A0A096LP49 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC187A0A096LP49 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCDC187A0A096LP49 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.04■□□□□ -0
CCDC187A0A096LP49 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CCDC187A0A096LP49 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CCDC187A0A096LP49 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.04■□□□□ -0
CCDC187A0A096LP49 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.04■□□□□ -0
CCDC187A0A096LP49 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CCDC187A0A096LP49 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCDC187A0A096LP49 AC134312.5-201ENST00000568031 1313 ntBASIC15.04■□□□□ -0
CCDC187A0A096LP49 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC187A0A096LP49 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC187A0A096LP49 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.04■□□□□ -0
CCDC187A0A096LP49 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCDC187A0A096LP49 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CCDC187A0A096LP49 KRT18P64-201ENST00000434946 1219 ntBASIC15.04■□□□□ -0
CCDC187A0A096LP49 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCDC187A0A096LP49 FTH1P14-201ENST00000482930 551 ntBASIC15.04■□□□□ -0
CCDC187A0A096LP49 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.04■□□□□ -0
CCDC187A0A096LP49 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.04■□□□□ -0
CCDC187A0A096LP49 CLUHP6-201ENST00000580789 941 ntBASIC15.04■□□□□ -0
CCDC187A0A096LP49 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.04■□□□□ -0
CCDC187A0A096LP49 AC084346.2-201ENST00000607097 949 ntBASIC15.04■□□□□ -0
CCDC187A0A096LP49 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CCDC187A0A096LP49 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCDC187A0A096LP49 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC187A0A096LP49 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.04■□□□□ -0
CCDC187A0A096LP49 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC187A0A096LP49 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.04■□□□□ -0
CCDC187A0A096LP49 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC187A0A096LP49 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCDC187A0A096LP49 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.03■□□□□ -0
CCDC187A0A096LP49 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CCDC187A0A096LP49 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC187A0A096LP49 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC187A0A096LP49 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC187A0A096LP49 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.03■□□□□ -0
CCDC187A0A096LP49 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.03■□□□□ -0
CCDC187A0A096LP49 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC187A0A096LP49 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC187A0A096LP49 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.03■□□□□ -0
CCDC187A0A096LP49 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC187A0A096LP49 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CCDC187A0A096LP49 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
CCDC187A0A096LP49 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC187A0A096LP49 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC187A0A096LP49 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC187A0A096LP49 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC187A0A096LP49 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.03■□□□□ -0
CCDC187A0A096LP49 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC187A0A096LP49 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CCDC187A0A096LP49 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC187A0A096LP49 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC187A0A096LP49 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC187A0A096LP49 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
CCDC187A0A096LP49 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC187A0A096LP49 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.03■□□□□ -0
CCDC187A0A096LP49 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.03■□□□□ -0
CCDC187A0A096LP49 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.03■□□□□ -0
CCDC187A0A096LP49 AC103810.3-201ENST00000583567 96 ntBASIC15.03■□□□□ -0
CCDC187A0A096LP49 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.03■□□□□ -0
CCDC187A0A096LP49 AC010328.2-201ENST00000597698 1111 ntBASIC15.03■□□□□ -0
CCDC187A0A096LP49 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.03■□□□□ -0
CCDC187A0A096LP49 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.03■□□□□ -0
CCDC187A0A096LP49 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC187A0A096LP49 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CCDC187A0A096LP49 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC187A0A096LP49 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC187A0A096LP49 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
CCDC187A0A096LP49 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC187A0A096LP49 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC187A0A096LP49 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CCDC187A0A096LP49 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.03■□□□□ -0
CCDC187A0A096LP49 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CCDC187A0A096LP49 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CCDC187A0A096LP49 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC187A0A096LP49 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
CCDC187A0A096LP49 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC187A0A096LP49 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.03■□□□□ -0
CCDC187A0A096LP49 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms