Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 TEX28P2-201ENST00000617764 1221 ntBASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAI2Q9Y5P3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 AC008894.3-201ENST00000624324 3103 ntBASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 AL512638.1-201ENST00000457493 794 ntBASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 AL596325.1-201ENST00000563991 1082 ntBASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 AP003680.1-201ENST00000598970 3660 ntBASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RAI2Q9Y5P3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 FO393414.2-201ENST00000405153 598 ntBASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 AZGP1P1-201ENST00000411909 902 ntBASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 AC027307.3-201ENST00000594262 1100 ntBASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 AC025048.6-201ENST00000634326 1161 ntBASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 AC018892.3-201ENST00000623986 2499 ntBASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 AC008741.2-201ENST00000612792 3115 ntBASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAI2Q9Y5P3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms