Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 TARDBPP1-201ENST00000442013 1203 ntBASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 AC012441.1-201ENST00000446669 685 ntBASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 DUX4L45-201ENST00000566406 1057 ntBASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 RHOXF1P1-202ENST00000635473 501 ntBASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA1Q9Y5H4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 MIR1247-201ENST00000408206 136 ntBASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 AC074338.1-201ENST00000416825 156 ntBASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 GPAA1P2-201ENST00000417923 928 ntBASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 POU5F1P6-201ENST00000466990 990 ntBASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 FTH1P14-201ENST00000482930 551 ntBASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 AC008687.7-202ENST00000637404 953 ntBASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGA1Q9Y5H4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA1Q9Y5H4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGA1Q9Y5H4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA1Q9Y5H4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA1Q9Y5H4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PCDHGA1Q9Y5H4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PCDHGA1Q9Y5H4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA1Q9Y5H4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA1Q9Y5H4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA1Q9Y5H4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.27■□□□□ 0.04
PCDHGA1Q9Y5H4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA1Q9Y5H4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.27■□□□□ 0.04
PCDHGA1Q9Y5H4 AC134312.5-201ENST00000568031 1313 ntBASIC15.27■□□□□ 0.04
PCDHGA1Q9Y5H4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PCDHGA1Q9Y5H4 AP001094.4-201ENST00000579008 2176 ntBASIC15.27■□□□□ 0.04
PCDHGA1Q9Y5H4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms