Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHB1Q9Y5F3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 AP3S2-216ENST00000617003 1561 ntBASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 NFIC-211ENST00000641145 8399 ntBASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 AC026979.3-201ENST00000607315 403 ntBASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHB1Q9Y5F3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
PCDHB1Q9Y5F3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHB1Q9Y5F3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.96■□□□□ 0.14
PCDHB1Q9Y5F3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
PCDHB1Q9Y5F3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHB1Q9Y5F3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 AL691432.1-201ENST00000596308 1422 ntBASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 KRT17P7-201ENST00000451704 1104 ntBASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHB1Q9Y5F3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms