Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 USP9YP2-201ENST00000504503 1000 ntBASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 USP9YP1-201ENST00000513521 1002 ntBASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 AC069262.1-201ENST00000539058 672 ntBASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 AC025678.2-201ENST00000562061 970 ntBASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 AC105021.1-202ENST00000570572 669 ntBASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 GPALPP1-207ENST00000611650 899 ntBASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 AC087821.1-201ENST00000623639 567 ntBASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHB13Q9Y5F0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 AL136982.4-201ENST00000437689 1740 ntBASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 AL139400.1-201ENST00000366220 510 ntBASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 AC109322.1-201ENST00000524499 1264 ntBASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 AC004449.1-201ENST00000564240 433 ntBASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 MIR4453-201ENST00000584019 89 ntBASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 MIR6080-201ENST00000617359 66 ntBASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 AL035456.1-201ENST00000456064 1369 ntBASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 AC134407.2-201ENST00000625089 1978 ntBASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB13Q9Y5F0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB13Q9Y5F0 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms