Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 AP005117.1-201ENST00000584346 1413 ntBASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RCL1Q9Y2P8 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 AP001269.4-201ENST00000609611 512 ntBASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RCL1Q9Y2P8 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 PTCHD3P3-201ENST00000403073 906 ntBASIC13.11□□□□□ -0.31
RCL1Q9Y2P8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms