Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VPS9D1Q9Y2B5 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 KRT18P32-201ENST00000424695 1287 ntBASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 AC004835.2-201ENST00000603762 682 ntBASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 AC079791.1-201ENST00000605356 973 ntBASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 AC040160.2-201ENST00000623816 1675 ntBASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.94■□□□□ 0.14
VPS9D1Q9Y2B5 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 BNIP3P1-202ENST00000550043 1585 ntBASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 UPF3AP3-201ENST00000420996 769 ntBASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 PAUPAR-201ENST00000630360 2965 ntBASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VPS9D1Q9Y2B5 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 PRAL-201ENST00000624952 3286 ntBASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VPS9D1Q9Y2B5 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms