Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 FOXO1B-201ENST00000504678 1527 ntBASIC15.22■□□□□ 0.03
LHX6Q9UPM6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 BCRP2-202ENST00000447763 634 ntBASIC15.22■□□□□ 0.03
LHX6Q9UPM6 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 BCRP6-201ENST00000510112 632 ntBASIC15.22■□□□□ 0.03
LHX6Q9UPM6 BCRP7-201ENST00000511549 544 ntBASIC15.22■□□□□ 0.03
LHX6Q9UPM6 MTND2P31-201ENST00000512602 616 ntBASIC15.22■□□□□ 0.03
LHX6Q9UPM6 PRYP6-201ENST00000514804 343 ntBASIC15.22■□□□□ 0.03
LHX6Q9UPM6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 MPDU1-223ENST00000582151 728 ntBASIC15.22■□□□□ 0.03
LHX6Q9UPM6 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 AC034229.4-201ENST00000607861 441 ntBASIC15.22■□□□□ 0.03
LHX6Q9UPM6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.22■□□□□ 0.03
LHX6Q9UPM6 RPSAP52-203ENST00000622976 1023 ntBASIC15.22■□□□□ 0.03
LHX6Q9UPM6 CU638689.4-208ENST00000623324 936 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 CU634019.6-203ENST00000624728 936 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.22■□□□□ 0.03
LHX6Q9UPM6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 AL513477.1-201ENST00000602865 2407 ntBASIC15.22■□□□□ 0.03
LHX6Q9UPM6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LHX6Q9UPM6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 RNA5SP410-201ENST00000516285 106 ntBASIC15.21■□□□□ 0.03
LHX6Q9UPM6 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 AC079414.2-201ENST00000567157 1104 ntBASIC15.21■□□□□ 0.03
LHX6Q9UPM6 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 AC011676.5-201ENST00000624864 2660 ntBASIC15.21■□□□□ 0.03
LHX6Q9UPM6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.21■□□□□ 0.03
LHX6Q9UPM6 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.21■□□□□ 0.02
LHX6Q9UPM6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
LHX6Q9UPM6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
LHX6Q9UPM6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
LHX6Q9UPM6 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 MFSD8-213ENST00000641134 1327 ntBASIC15.2■□□□□ 0.02
LHX6Q9UPM6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LHX6Q9UPM6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms