Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 PMS2P4-201ENST00000412466 1052 ntBASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 AL450487.1-201ENST00000426799 995 ntBASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 LINC02447-202ENST00000501888 2146 ntBASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 AC093909.1-201ENST00000504731 1122 ntBASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 AL160237.2-201ENST00000556165 472 ntBASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 AL031432.2-201ENST00000566714 459 ntBASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 AL928711.1-201ENST00000570165 459 ntBASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 AL691432.3-201ENST00000621860 400 ntBASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGB4Q9UN71 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 MIR648-201ENST00000385046 94 ntBASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 FAAHP1-202ENST00000446499 1238 ntBASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 AC108751.1-201ENST00000490852 363 ntBASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 OR7E47P-204ENST00000575924 449 ntBASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 ACTL9-202ENST00000612068 1252 ntBASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 AL773604.1-201ENST00000617417 272 ntBASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 AC117500.6-201ENST00000624871 588 ntBASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 FAM215A-202ENST00000632077 792 ntBASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB4Q9UN71 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 AL592424.1-201ENST00000563624 1536 ntBASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 RNU1-129P-201ENST00000384064 167 ntBASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
PCDHGB4Q9UN71 CRYGEP-201ENST00000412192 528 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms