Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NLKQ9UBE8 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NLKQ9UBE8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NLKQ9UBE8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
NLKQ9UBE8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.27□□□□□ -0.13
NLKQ9UBE8 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NLKQ9UBE8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.27□□□□□ -0.13
NLKQ9UBE8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.27□□□□□ -0.13
NLKQ9UBE8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.27□□□□□ -0.13
NLKQ9UBE8 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.27□□□□□ -0.13
NLKQ9UBE8 IGHV3-65-201ENST00000523210 341 ntBASIC14.27□□□□□ -0.13
NLKQ9UBE8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NLKQ9UBE8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.27□□□□□ -0.13
NLKQ9UBE8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.27□□□□□ -0.13
NLKQ9UBE8 DUX4L17-201ENST00000557360 1267 ntBASIC14.27□□□□□ -0.13
NLKQ9UBE8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.27□□□□□ -0.13
NLKQ9UBE8 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.27□□□□□ -0.13
NLKQ9UBE8 AL049840.3-201ENST00000602669 611 ntBASIC14.27□□□□□ -0.13
NLKQ9UBE8 AL121894.2-201ENST00000602977 491 ntBASIC14.27□□□□□ -0.13
NLKQ9UBE8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.27□□□□□ -0.13
NLKQ9UBE8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.27□□□□□ -0.13
NLKQ9UBE8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.27□□□□□ -0.13
NLKQ9UBE8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
NLKQ9UBE8 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
NLKQ9UBE8 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NLKQ9UBE8 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
NLKQ9UBE8 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
NLKQ9UBE8 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.27□□□□□ -0.13
NLKQ9UBE8 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NLKQ9UBE8 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NLKQ9UBE8 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
NLKQ9UBE8 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NLKQ9UBE8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.27□□□□□ -0.13
NLKQ9UBE8 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.27□□□□□ -0.13
NLKQ9UBE8 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.27□□□□□ -0.13
NLKQ9UBE8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NLKQ9UBE8 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NLKQ9UBE8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NLKQ9UBE8 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NLKQ9UBE8 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NLKQ9UBE8 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NLKQ9UBE8 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NLKQ9UBE8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.26□□□□□ -0.13
NLKQ9UBE8 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.26□□□□□ -0.13
NLKQ9UBE8 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.26□□□□□ -0.13
NLKQ9UBE8 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.26□□□□□ -0.13
NLKQ9UBE8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.26□□□□□ -0.13
NLKQ9UBE8 KRT8P49-201ENST00000604166 1432 ntBASIC14.26□□□□□ -0.13
NLKQ9UBE8 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.26□□□□□ -0.13
NLKQ9UBE8 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.26□□□□□ -0.13
NLKQ9UBE8 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
NLKQ9UBE8 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NLKQ9UBE8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.26□□□□□ -0.13
NLKQ9UBE8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NLKQ9UBE8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.26□□□□□ -0.13
NLKQ9UBE8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.26□□□□□ -0.13
NLKQ9UBE8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.26□□□□□ -0.13
NLKQ9UBE8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.26□□□□□ -0.13
NLKQ9UBE8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.26□□□□□ -0.13
NLKQ9UBE8 AC117500.6-201ENST00000624871 588 ntBASIC14.26□□□□□ -0.13
NLKQ9UBE8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.26□□□□□ -0.13
NLKQ9UBE8 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 LINC01101-201ENST00000622953 1884 ntBASIC14.26□□□□□ -0.13
NLKQ9UBE8 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NLKQ9UBE8 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.26□□□□□ -0.13
NLKQ9UBE8 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NLKQ9UBE8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.26□□□□□ -0.13
NLKQ9UBE8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.26□□□□□ -0.13
NLKQ9UBE8 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
NLKQ9UBE8 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.25□□□□□ -0.13
NLKQ9UBE8 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NLKQ9UBE8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NLKQ9UBE8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NLKQ9UBE8 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.25□□□□□ -0.13
NLKQ9UBE8 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NLKQ9UBE8 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms