Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBQLN3Q9H347 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBQLN3Q9H347 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBQLN3Q9H347 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBQLN3Q9H347 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBQLN3Q9H347 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UBQLN3Q9H347 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.83□□□□□ -0.04
UBQLN3Q9H347 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
UBQLN3Q9H347 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
UBQLN3Q9H347 AC144831.1-201ENST00000573312 2656 ntBASIC14.83□□□□□ -0.04
UBQLN3Q9H347 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBQLN3Q9H347 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.83□□□□□ -0.04
UBQLN3Q9H347 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.83□□□□□ -0.04
UBQLN3Q9H347 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
UBQLN3Q9H347 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
UBQLN3Q9H347 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
UBQLN3Q9H347 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
UBQLN3Q9H347 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBQLN3Q9H347 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.83□□□□□ -0.04
UBQLN3Q9H347 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
UBQLN3Q9H347 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.82□□□□□ -0.04
UBQLN3Q9H347 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 AC055876.3-201ENST00000431496 288 ntBASIC14.82□□□□□ -0.04
UBQLN3Q9H347 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 AL158211.3-201ENST00000607385 239 ntBASIC14.82□□□□□ -0.04
UBQLN3Q9H347 AC138649.4-201ENST00000612222 287 ntBASIC14.82□□□□□ -0.04
UBQLN3Q9H347 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBQLN3Q9H347 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 AC022532.1-201ENST00000624563 1728 ntBASIC14.81□□□□□ -0.04
UBQLN3Q9H347 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 U82695.1-201ENST00000635752 1889 ntBASIC14.81□□□□□ -0.04
UBQLN3Q9H347 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 MIR943-201ENST00000401286 94 ntBASIC14.81□□□□□ -0.04
UBQLN3Q9H347 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBQLN3Q9H347 RNA5SP410-201ENST00000516285 106 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms