Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 AC134407.2-201ENST00000625089 1978 ntBASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 COX11P1-201ENST00000489116 835 ntBASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 MTHFR-210ENST00000641407 2387 ntBASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 AC152010.1-201ENST00000415779 2006 ntBASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.06□□□□□ -0.16
SLIRPQ9GZT3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 AC113367.3-201ENST00000508316 1912 ntBASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 ACE3P-201ENST00000423435 1973 ntBASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 AP001267.2-201ENST00000532619 2086 ntBASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 AC091607.1-201ENST00000490318 1060 ntBASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 AC010331.1-201ENST00000611423 582 ntBASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SLIRPQ9GZT3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 SLC25A3P1-201ENST00000443844 931 ntBASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.04□□□□□ -0.16
SLIRPQ9GZT3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms