Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CPNE1Q99829 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE1Q99829 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE1Q99829 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE1Q99829 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE1Q99829 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE1Q99829 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE1Q99829 IL9RP2-201ENST00000423948 1312 ntBASIC15.98■□□□□ 0.15
CPNE1Q99829 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE1Q99829 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE1Q99829 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE1Q99829 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.98■□□□□ 0.15
CPNE1Q99829 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.98■□□□□ 0.15
CPNE1Q99829 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE1Q99829 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.98■□□□□ 0.15
CPNE1Q99829 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.98■□□□□ 0.15
CPNE1Q99829 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE1Q99829 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE1Q99829 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE1Q99829 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CPNE1Q99829 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE1Q99829 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.98■□□□□ 0.15
CPNE1Q99829 AC142381.1-201ENST00000426099 345 ntBASIC15.98■□□□□ 0.15
CPNE1Q99829 RPS8P6-201ENST00000426177 609 ntBASIC15.98■□□□□ 0.15
CPNE1Q99829 AL591424.1-201ENST00000442569 1213 ntBASIC15.98■□□□□ 0.15
CPNE1Q99829 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.98■□□□□ 0.15
CPNE1Q99829 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.98■□□□□ 0.15
CPNE1Q99829 AL135744.1-201ENST00000565098 629 ntBASIC15.98■□□□□ 0.15
CPNE1Q99829 AC027307.2-201ENST00000591252 911 ntBASIC15.98■□□□□ 0.15
CPNE1Q99829 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.98■□□□□ 0.15
CPNE1Q99829 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE1Q99829 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
CPNE1Q99829 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CPNE1Q99829 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE1Q99829 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE1Q99829 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.98■□□□□ 0.15
CPNE1Q99829 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE1Q99829 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE1Q99829 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE1Q99829 AC112693.3-201ENST00000624819 1983 ntBASIC15.98■□□□□ 0.15
CPNE1Q99829 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CPNE1Q99829 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CPNE1Q99829 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE1Q99829 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE1Q99829 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE1Q99829 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE1Q99829 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE1Q99829 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.97■□□□□ 0.15
CPNE1Q99829 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE1Q99829 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE1Q99829 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE1Q99829 FLJ16779-201ENST00000612722 7638 ntBASIC15.97■□□□□ 0.15
CPNE1Q99829 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE1Q99829 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.97■□□□□ 0.15
CPNE1Q99829 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
CPNE1Q99829 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.97■□□□□ 0.15
CPNE1Q99829 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CPNE1Q99829 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.97■□□□□ 0.15
CPNE1Q99829 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.97■□□□□ 0.15
CPNE1Q99829 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.97■□□□□ 0.15
CPNE1Q99829 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CPNE1Q99829 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE1Q99829 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CPNE1Q99829 FAM220BP-201ENST00000377689 816 ntBASIC15.97■□□□□ 0.15
CPNE1Q99829 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE1Q99829 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.97■□□□□ 0.15
CPNE1Q99829 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.97■□□□□ 0.15
CPNE1Q99829 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE1Q99829 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.97■□□□□ 0.15
CPNE1Q99829 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE1Q99829 TFAMP1-201ENST00000412727 736 ntBASIC15.97■□□□□ 0.15
CPNE1Q99829 AL355306.1-201ENST00000415580 579 ntBASIC15.97■□□□□ 0.15
CPNE1Q99829 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.97■□□□□ 0.15
CPNE1Q99829 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.97■□□□□ 0.15
CPNE1Q99829 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.97■□□□□ 0.15
CPNE1Q99829 MIR4313-201ENST00000580760 101 ntBASIC15.97■□□□□ 0.15
CPNE1Q99829 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE1Q99829 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.97■□□□□ 0.15
CPNE1Q99829 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE1Q99829 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.97■□□□□ 0.15
CPNE1Q99829 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE1Q99829 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CPNE1Q99829 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE1Q99829 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE1Q99829 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.97■□□□□ 0.15
CPNE1Q99829 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE1Q99829 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CPNE1Q99829 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE1Q99829 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE1Q99829 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CPNE1Q99829 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CPNE1Q99829 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.97■□□□□ 0.15
CPNE1Q99829 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE1Q99829 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.97■□□□□ 0.15
CPNE1Q99829 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE1Q99829 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE1Q99829 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE1Q99829 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE1Q99829 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.96■□□□□ 0.15
CPNE1Q99829 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms