Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AC036164.1-201ENST00000570544 333 ntBASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 AL607033.1-201ENST00000623900 1599 ntBASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
CCDC85AQ96PX6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 AP001282.1-201ENST00000531301 1499 ntBASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 MIR4259-201ENST00000584466 101 ntBASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 AL450472.2-201ENST00000603663 1156 ntBASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 AL512343.1-201ENST00000605837 169 ntBASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC85AQ96PX6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 FAM86LP-201ENST00000478302 853 ntBASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 SNX29P1-201ENST00000548357 1007 ntBASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC85AQ96PX6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC85AQ96PX6 USP40-206ENST00000443711 628 ntTSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms