Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.41■□□□□ 0.06
VPS33AQ96AX1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 AC073439.1-201ENST00000624121 1774 ntBASIC15.4■□□□□ 0.06
VPS33AQ96AX1 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.4■□□□□ 0.06
VPS33AQ96AX1 KRT18P34-201ENST00000488218 1270 ntBASIC15.4■□□□□ 0.06
VPS33AQ96AX1 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 AL009183.1-201ENST00000603760 355 ntBASIC15.4■□□□□ 0.06
VPS33AQ96AX1 AL365330.1-201ENST00000607459 531 ntBASIC15.4■□□□□ 0.06
VPS33AQ96AX1 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VPS33AQ96AX1 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 AC091951.1-201ENST00000512854 2465 ntBASIC15.39■□□□□ 0.05
VPS33AQ96AX1 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 VN2R19P-201ENST00000442399 1052 ntBASIC15.39■□□□□ 0.05
VPS33AQ96AX1 AC245100.5-201ENST00000452108 331 ntBASIC15.39■□□□□ 0.05
VPS33AQ96AX1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 KRT18P56-201ENST00000507275 550 ntBASIC15.39■□□□□ 0.05
VPS33AQ96AX1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.39■□□□□ 0.05
VPS33AQ96AX1 AL049840.3-201ENST00000602669 611 ntBASIC15.39■□□□□ 0.05
VPS33AQ96AX1 AL078644.1-201ENST00000609881 752 ntBASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms