Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 AC004987.2-201ENST00000395959 1148 ntBASIC14.03□□□□□ -0.16
SPTSSAQ969W0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 CEND1P1-201ENST00000451006 455 ntBASIC14.03□□□□□ -0.16
SPTSSAQ969W0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 MIR3687-2-201ENST00000577708 61 ntBASIC14.03□□□□□ -0.16
SPTSSAQ969W0 MIR3687-1-201ENST00000614492 61 ntBASIC14.03□□□□□ -0.16
SPTSSAQ969W0 AC055717.3-201ENST00000622967 595 ntBASIC14.03□□□□□ -0.16
SPTSSAQ969W0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 ELL2P1-201ENST00000413990 1906 ntBASIC14.03□□□□□ -0.16
SPTSSAQ969W0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPTSSAQ969W0 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SPTSSAQ969W0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
SPTSSAQ969W0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPTSSAQ969W0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPTSSAQ969W0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPTSSAQ969W0 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPTSSAQ969W0 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SPTSSAQ969W0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.02□□□□□ -0.16
SPTSSAQ969W0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SPTSSAQ969W0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SPTSSAQ969W0 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.02□□□□□ -0.16
SPTSSAQ969W0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPTSSAQ969W0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SPTSSAQ969W0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
SPTSSAQ969W0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.02□□□□□ -0.16
SPTSSAQ969W0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SPTSSAQ969W0 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.02□□□□□ -0.16
SPTSSAQ969W0 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.02□□□□□ -0.16
SPTSSAQ969W0 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPTSSAQ969W0 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPTSSAQ969W0 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.02□□□□□ -0.16
SPTSSAQ969W0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
SPTSSAQ969W0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SPTSSAQ969W0 AL691432.1-201ENST00000596308 1422 ntBASIC14.02□□□□□ -0.16
SPTSSAQ969W0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 AL139010.1-201ENST00000454878 894 ntBASIC14.02□□□□□ -0.17
SPTSSAQ969W0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 LINC01225-203ENST00000563550 1244 ntBASIC14.02□□□□□ -0.17
SPTSSAQ969W0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.02□□□□□ -0.17
SPTSSAQ969W0 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPTSSAQ969W0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SPTSSAQ969W0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPTSSAQ969W0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SPTSSAQ969W0 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SPTSSAQ969W0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms