Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SEMA4DQ92854 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SEMA4DQ92854 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SEMA4DQ92854 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SEMA4DQ92854 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.13■□□□□ 0.33
SEMA4DQ92854 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.13■□□□□ 0.33
SEMA4DQ92854 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SEMA4DQ92854 FO538757.1-201ENST00000623083 1397 ntBASIC17.13■□□□□ 0.33
SEMA4DQ92854 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
SEMA4DQ92854 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SEMA4DQ92854 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SEMA4DQ92854 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SEMA4DQ92854 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA4DQ92854 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA4DQ92854 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA4DQ92854 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA4DQ92854 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SEMA4DQ92854 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA4DQ92854 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SEMA4DQ92854 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.12■□□□□ 0.33
SEMA4DQ92854 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SEMA4DQ92854 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA4DQ92854 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SEMA4DQ92854 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA4DQ92854 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.12■□□□□ 0.33
SEMA4DQ92854 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA4DQ92854 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SEMA4DQ92854 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA4DQ92854 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA4DQ92854 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.12■□□□□ 0.33
SEMA4DQ92854 FAM86GP-201ENST00000448322 971 ntBASIC17.12■□□□□ 0.33
SEMA4DQ92854 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.12■□□□□ 0.33
SEMA4DQ92854 AC069120.2-201ENST00000524091 540 ntBASIC17.12■□□□□ 0.33
SEMA4DQ92854 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.12■□□□□ 0.33
SEMA4DQ92854 AL512361.1-201ENST00000554200 418 ntBASIC17.12■□□□□ 0.33
SEMA4DQ92854 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.12■□□□□ 0.33
SEMA4DQ92854 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.12■□□□□ 0.33
SEMA4DQ92854 AC073592.8-201ENST00000624126 511 ntBASIC17.12■□□□□ 0.33
SEMA4DQ92854 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.12■□□□□ 0.33
SEMA4DQ92854 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA4DQ92854 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA4DQ92854 AC105250.1-201ENST00000509378 2057 ntBASIC17.12■□□□□ 0.33
SEMA4DQ92854 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SEMA4DQ92854 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.12■□□□□ 0.33
SEMA4DQ92854 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA4DQ92854 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.12■□□□□ 0.33
SEMA4DQ92854 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA4DQ92854 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.12■□□□□ 0.33
SEMA4DQ92854 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA4DQ92854 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA4DQ92854 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.12■□□□□ 0.33
SEMA4DQ92854 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SEMA4DQ92854 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA4DQ92854 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.11■□□□□ 0.33
SEMA4DQ92854 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA4DQ92854 HYMAI-201ENST00000635591 3347 ntBASIC17.11■□□□□ 0.33
SEMA4DQ92854 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA4DQ92854 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA4DQ92854 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.11■□□□□ 0.33
SEMA4DQ92854 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA4DQ92854 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SEMA4DQ92854 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA4DQ92854 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.11■□□□□ 0.33
SEMA4DQ92854 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA4DQ92854 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA4DQ92854 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA4DQ92854 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA4DQ92854 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA4DQ92854 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA4DQ92854 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.11■□□□□ 0.33
SEMA4DQ92854 AC074338.1-201ENST00000416825 156 ntBASIC17.11■□□□□ 0.33
SEMA4DQ92854 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.11■□□□□ 0.33
SEMA4DQ92854 AL645939.2-201ENST00000427340 991 ntBASIC17.11■□□□□ 0.33
SEMA4DQ92854 TARDBPP1-201ENST00000442013 1203 ntBASIC17.11■□□□□ 0.33
SEMA4DQ92854 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.11■□□□□ 0.33
SEMA4DQ92854 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.11■□□□□ 0.33
SEMA4DQ92854 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.11■□□□□ 0.33
SEMA4DQ92854 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.11■□□□□ 0.33
SEMA4DQ92854 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.11■□□□□ 0.33
SEMA4DQ92854 AL033527.5-202ENST00000641632 1098 ntBASIC17.11■□□□□ 0.33
SEMA4DQ92854 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA4DQ92854 AC136621.1-201ENST00000624017 2304 ntBASIC17.11■□□□□ 0.33
SEMA4DQ92854 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.11■□□□□ 0.33
SEMA4DQ92854 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.11■□□□□ 0.33
SEMA4DQ92854 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA4DQ92854 AC020658.6-201ENST00000623564 1870 ntBASIC17.11■□□□□ 0.33
SEMA4DQ92854 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA4DQ92854 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SEMA4DQ92854 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA4DQ92854 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
SEMA4DQ92854 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA4DQ92854 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SEMA4DQ92854 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA4DQ92854 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.11■□□□□ 0.33
SEMA4DQ92854 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SEMA4DQ92854 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA4DQ92854 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
SEMA4DQ92854 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SEMA4DQ92854 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA4DQ92854 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms