Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 AC011270.2-201ENST00000624293 2550 ntBASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 AC011477.6-201ENST00000604980 1927 ntBASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 GPX1P2-201ENST00000429271 606 ntBASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 AC134407.2-201ENST00000625089 1978 ntBASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAF3IP1Q8TDR0 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRAF3IP1Q8TDR0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TRAF3IP1Q8TDR0 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TRAF3IP1Q8TDR0 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRAF3IP1Q8TDR0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRAF3IP1Q8TDR0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 AC142381.1-201ENST00000426099 345 ntBASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 ADH5P3-201ENST00000433842 1137 ntBASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 MKNK2P1-201ENST00000437526 628 ntBASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 AC079140.1-201ENST00000508039 487 ntBASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 AC243562.1-201ENST00000560672 389 ntBASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 AC243562.2-201ENST00000561247 970 ntBASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAF3IP1Q8TDR0 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 HTR5BP-201ENST00000430851 1154 ntBASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 SPCS2P4-201ENST00000436160 681 ntBASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 KRT8P48-201ENST00000515599 1220 ntBASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 AP000842.3-202ENST00000569238 1080 ntBASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 AC061975.2-201ENST00000581722 295 ntBASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAF3IP1Q8TDR0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms