Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 AC022188.1-201ENST00000620960 1664 ntBASIC14.01□□□□□ -0.17
CPEB3Q8NE35 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CPEB3Q8NE35 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CPEB3Q8NE35 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14□□□□□ -0.17
CPEB3Q8NE35 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CPEB3Q8NE35 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CPEB3Q8NE35 KRT18P28-201ENST00000453838 1332 ntBASIC14□□□□□ -0.17
CPEB3Q8NE35 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CPEB3Q8NE35 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CPEB3Q8NE35 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CPEB3Q8NE35 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CPEB3Q8NE35 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CPEB3Q8NE35 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CPEB3Q8NE35 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CPEB3Q8NE35 AC004987.2-201ENST00000395959 1148 ntBASIC14□□□□□ -0.17
CPEB3Q8NE35 LBH-203ENST00000404397 543 ntTSL 4 BASIC14□□□□□ -0.17
CPEB3Q8NE35 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14□□□□□ -0.17
CPEB3Q8NE35 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
CPEB3Q8NE35 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14□□□□□ -0.17
CPEB3Q8NE35 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14□□□□□ -0.17
CPEB3Q8NE35 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14□□□□□ -0.17
CPEB3Q8NE35 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14□□□□□ -0.17
CPEB3Q8NE35 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14□□□□□ -0.17
CPEB3Q8NE35 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14□□□□□ -0.17
CPEB3Q8NE35 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14□□□□□ -0.17
CPEB3Q8NE35 AC004449.1-201ENST00000564240 433 ntBASIC14□□□□□ -0.17
CPEB3Q8NE35 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14□□□□□ -0.17
CPEB3Q8NE35 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14□□□□□ -0.17
CPEB3Q8NE35 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CPEB3Q8NE35 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14□□□□□ -0.17
CPEB3Q8NE35 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14□□□□□ -0.17
CPEB3Q8NE35 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CPEB3Q8NE35 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
CPEB3Q8NE35 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CPEB3Q8NE35 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14□□□□□ -0.17
CPEB3Q8NE35 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CPEB3Q8NE35 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14□□□□□ -0.17
CPEB3Q8NE35 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CPEB3Q8NE35 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CPEB3Q8NE35 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CPEB3Q8NE35 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14□□□□□ -0.17
CPEB3Q8NE35 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14□□□□□ -0.17
CPEB3Q8NE35 CYP4F24P-201ENST00000586049 1580 ntBASIC14□□□□□ -0.17
CPEB3Q8NE35 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CPEB3Q8NE35 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14□□□□□ -0.17
CPEB3Q8NE35 AC011477.6-201ENST00000604980 1927 ntBASIC14□□□□□ -0.17
CPEB3Q8NE35 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 PRAL-201ENST00000624952 3286 ntBASIC13.99□□□□□ -0.17
CPEB3Q8NE35 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 RN7SL828P-201ENST00000607615 303 ntBASIC13.99□□□□□ -0.17
CPEB3Q8NE35 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 AC093028.1-201ENST00000622998 982 ntBASIC13.99□□□□□ -0.17
CPEB3Q8NE35 Z92544.3-201ENST00000624747 417 ntBASIC13.99□□□□□ -0.17
CPEB3Q8NE35 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.99□□□□□ -0.17
CPEB3Q8NE35 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CPEB3Q8NE35 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms