Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC17A8Q8NDX2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.96■□□□□ 0.46
SLC17A8Q8NDX2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 AP001889.1-201ENST00000525414 633 ntBASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 MIR5572-201ENST00000583188 137 ntBASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 AC007431.3-201ENST00000623221 587 ntBASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC17A8Q8NDX2 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 AL162727.3-201ENST00000635661 2787 ntBASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 AC061975.2-201ENST00000581722 295 ntBASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SLC17A8Q8NDX2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC17A8Q8NDX2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC17A8Q8NDX2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC17A8Q8NDX2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC17A8Q8NDX2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms