Protein–RNA interactions for Protein: Q8N9B4

ANKRD42, Ankyrin repeat domain-containing protein 42, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD42Q8N9B4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 ELK2BP-201ENST00000415014 1224 ntBASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 AC012615.1-201ENST00000565797 1299 ntBASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 AC009090.5-201ENST00000624886 2285 ntBASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ANKRD42Q8N9B4 AGAP7P-201ENST00000582299 2062 ntBASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 AGAP14-201ENST00000624701 2060 ntBASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 AC006504.4-201ENST00000592118 1568 ntBASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 FAM86EP-206ENST00000510506 987 ntBASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 RN7SL850P-201ENST00000579959 291 ntBASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 AC138894.3-201ENST00000603787 634 ntBASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 AC104581.4-201ENST00000623126 3052 ntBASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ANKRD42Q8N9B4 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ANKRD42Q8N9B4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ANKRD42Q8N9B4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ANKRD42Q8N9B4 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ANKRD42Q8N9B4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ANKRD42Q8N9B4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ANKRD42Q8N9B4 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ANKRD42Q8N9B4 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ANKRD42Q8N9B4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ANKRD42Q8N9B4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ANKRD42Q8N9B4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ANKRD42Q8N9B4 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ANKRD42Q8N9B4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.17■□□□□ 0.18
ANKRD42Q8N9B4 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ANKRD42Q8N9B4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
ANKRD42Q8N9B4 AC211429.1-201ENST00000415277 523 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms