Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COMMD1Q8N668 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
COMMD1Q8N668 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.36□□□□□ -0.27
COMMD1Q8N668 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COMMD1Q8N668 AC016027.1-202ENST00000607927 1699 ntBASIC13.36□□□□□ -0.27
COMMD1Q8N668 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COMMD1Q8N668 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COMMD1Q8N668 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COMMD1Q8N668 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COMMD1Q8N668 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COMMD1Q8N668 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
COMMD1Q8N668 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
COMMD1Q8N668 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
COMMD1Q8N668 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
COMMD1Q8N668 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
COMMD1Q8N668 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
COMMD1Q8N668 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
COMMD1Q8N668 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COMMD1Q8N668 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
COMMD1Q8N668 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COMMD1Q8N668 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
COMMD1Q8N668 CICP24-201ENST00000605464 2705 ntBASIC13.35□□□□□ -0.27
COMMD1Q8N668 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COMMD1Q8N668 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.35□□□□□ -0.27
COMMD1Q8N668 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
COMMD1Q8N668 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
COMMD1Q8N668 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
COMMD1Q8N668 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.35□□□□□ -0.27
COMMD1Q8N668 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.35□□□□□ -0.27
COMMD1Q8N668 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
COMMD1Q8N668 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.35□□□□□ -0.27
COMMD1Q8N668 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
COMMD1Q8N668 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
COMMD1Q8N668 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
COMMD1Q8N668 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
COMMD1Q8N668 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COMMD1Q8N668 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
COMMD1Q8N668 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COMMD1Q8N668 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
COMMD1Q8N668 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COMMD1Q8N668 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COMMD1Q8N668 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
COMMD1Q8N668 MIR1233-2-201ENST00000408138 82 ntBASIC13.35□□□□□ -0.27
COMMD1Q8N668 MIR1233-1-201ENST00000408722 82 ntBASIC13.35□□□□□ -0.27
COMMD1Q8N668 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.35□□□□□ -0.27
COMMD1Q8N668 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.35□□□□□ -0.27
COMMD1Q8N668 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.35□□□□□ -0.27
COMMD1Q8N668 CXCL1P1-201ENST00000502804 216 ntBASIC13.35□□□□□ -0.27
COMMD1Q8N668 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.35□□□□□ -0.27
COMMD1Q8N668 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.35□□□□□ -0.27
COMMD1Q8N668 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COMMD1Q8N668 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.35□□□□□ -0.27
COMMD1Q8N668 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.35□□□□□ -0.27
COMMD1Q8N668 AC023141.13-201ENST00000604991 943 ntBASIC13.35□□□□□ -0.27
COMMD1Q8N668 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COMMD1Q8N668 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COMMD1Q8N668 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.35□□□□□ -0.27
COMMD1Q8N668 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COMMD1Q8N668 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
COMMD1Q8N668 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.35□□□□□ -0.27
COMMD1Q8N668 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COMMD1Q8N668 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
COMMD1Q8N668 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.35□□□□□ -0.27
COMMD1Q8N668 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.35□□□□□ -0.27
COMMD1Q8N668 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COMMD1Q8N668 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COMMD1Q8N668 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.35□□□□□ -0.27
COMMD1Q8N668 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COMMD1Q8N668 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.35□□□□□ -0.27
COMMD1Q8N668 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COMMD1Q8N668 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COMMD1Q8N668 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.34□□□□□ -0.27
COMMD1Q8N668 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.34□□□□□ -0.27
COMMD1Q8N668 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
COMMD1Q8N668 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
COMMD1Q8N668 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
COMMD1Q8N668 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
COMMD1Q8N668 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
COMMD1Q8N668 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
COMMD1Q8N668 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COMMD1Q8N668 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
COMMD1Q8N668 LINC00528-201ENST00000600723 2160 ntBASIC13.34□□□□□ -0.27
COMMD1Q8N668 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.34□□□□□ -0.27
COMMD1Q8N668 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
COMMD1Q8N668 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
COMMD1Q8N668 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
COMMD1Q8N668 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.34□□□□□ -0.27
COMMD1Q8N668 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
COMMD1Q8N668 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
COMMD1Q8N668 RHOQP3-201ENST00000437982 621 ntBASIC13.34□□□□□ -0.27
COMMD1Q8N668 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.34□□□□□ -0.27
COMMD1Q8N668 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.34□□□□□ -0.27
COMMD1Q8N668 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.34□□□□□ -0.27
COMMD1Q8N668 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
COMMD1Q8N668 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.34□□□□□ -0.27
COMMD1Q8N668 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.34□□□□□ -0.27
COMMD1Q8N668 AC006538.3-201ENST00000612495 578 ntBASIC13.34□□□□□ -0.27
COMMD1Q8N668 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.34□□□□□ -0.27
COMMD1Q8N668 AL139011.1-202ENST00000642063 584 ntBASIC13.34□□□□□ -0.27
COMMD1Q8N668 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms