Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
LINC00311Q8N616 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC00311Q8N616 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00311Q8N616 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00311Q8N616 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00311Q8N616 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00311Q8N616 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00311Q8N616 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00311Q8N616 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00311Q8N616 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC00311Q8N616 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LINC00311Q8N616 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 AL607033.1-201ENST00000623900 1599 ntBASIC12.9□□□□□ -0.34
LINC00311Q8N616 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00311Q8N616 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00311Q8N616 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00311Q8N616 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00311Q8N616 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00311Q8N616 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00311Q8N616 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00311Q8N616 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00311Q8N616 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00311Q8N616 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00311Q8N616 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00311Q8N616 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00311Q8N616 KLF2P3-201ENST00000451977 1087 ntBASIC12.9□□□□□ -0.34
LINC00311Q8N616 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00311Q8N616 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00311Q8N616 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 AC073592.8-201ENST00000624126 511 ntBASIC12.9□□□□□ -0.34
LINC00311Q8N616 PAUPAR-201ENST00000630360 2965 ntBASIC12.9□□□□□ -0.34
LINC00311Q8N616 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 AL033527.5-202ENST00000641632 1098 ntBASIC12.9□□□□□ -0.34
LINC00311Q8N616 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00311Q8N616 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00311Q8N616 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00311Q8N616 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00311Q8N616 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00311Q8N616 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00311Q8N616 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00311Q8N616 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00311Q8N616 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LINC00311Q8N616 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
LINC00311Q8N616 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
LINC00311Q8N616 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
LINC00311Q8N616 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
LINC00311Q8N616 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
LINC00311Q8N616 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00311Q8N616 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00311Q8N616 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00311Q8N616 LTF-203ENST00000426532 2494 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00311Q8N616 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00311Q8N616 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00311Q8N616 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00311Q8N616 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00311Q8N616 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00311Q8N616 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
LINC00311Q8N616 AL162727.3-201ENST00000635661 2787 ntBASIC12.89□□□□□ -0.35
LINC00311Q8N616 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00311Q8N616 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00311Q8N616 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00311Q8N616 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00311Q8N616 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00311Q8N616 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00311Q8N616 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00311Q8N616 Z97205.2-201ENST00000564697 1639 ntBASIC12.89□□□□□ -0.35
LINC00311Q8N616 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00311Q8N616 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00311Q8N616 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00311Q8N616 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00311Q8N616 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00311Q8N616 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00311Q8N616 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.89□□□□□ -0.35
LINC00311Q8N616 RPL37AP1-201ENST00000412502 279 ntBASIC12.89□□□□□ -0.35
LINC00311Q8N616 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms