Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 FAM8A3P-201ENST00000427218 844 ntBASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 MIR4313-201ENST00000580760 101 ntBASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 AC004461.2-201ENST00000629517 803 ntBASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAM1L1Q8N609 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 AC022188.1-201ENST00000620960 1664 ntBASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 NFIC-211ENST00000641145 8399 ntBASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 AC074338.1-201ENST00000416825 156 ntBASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 FAM207CP-201ENST00000443486 507 ntBASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 AC009118.2-201ENST00000613275 655 ntBASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAM1L1Q8N609 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 AC018695.7-201ENST00000624587 2492 ntBASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 AC092337.1-201ENST00000568699 1129 ntBASIC15.72■□□□□ 0.11
TRAM1L1Q8N609 MIR4745-201ENST00000577608 62 ntBASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms