Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 TERF1P3-201ENST00000505638 1227 ntBASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 AC022144.1-201ENST00000602255 1580 ntBASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM48Q8IWZ4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 AC087499.5-201ENST00000452760 1342 ntBASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 AC236430.1-201ENST00000402231 743 ntBASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 AL080243.2-201ENST00000418783 582 ntBASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 UGT1A2P-201ENST00000454886 866 ntBASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM48Q8IWZ4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
TRIM48Q8IWZ4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms