Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 AC093004.1-201ENST00000508850 424 ntBASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 API5-211ENST00000534695 560 ntTSL 5 BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 AC012645.4-201ENST00000610691 1061 ntBASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCN4BQ8IWT1 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 RN7SL692P-201ENST00000464677 288 ntBASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 AC023310.3-201ENST00000557027 670 ntBASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 AC005225.4-201ENST00000557330 545 ntBASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 AC100756.1-201ENST00000562736 682 ntBASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 AC138749.3-201ENST00000567691 622 ntBASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 LINC01115-203ENST00000606068 577 ntBASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 AC116165.1-201ENST00000611806 668 ntBASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCN4BQ8IWT1 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 AC087499.6-201ENST00000411576 835 ntBASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 PHKG1P2-201ENST00000457537 863 ntBASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 TP53TG3HP-202ENST00000569755 579 ntBASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 AC140912.1-201ENST00000577171 1054 ntBASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 CHCHD2P3-201ENST00000603038 451 ntBASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 AL035252.4-201ENST00000624174 288 ntBASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCN4BQ8IWT1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms