Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
HERC6Q8IVU3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 AC006538.1-201ENST00000567905 1585 ntBASIC17.2■□□□□ 0.34
HERC6Q8IVU3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 KRT8P13-201ENST00000463294 1010 ntBASIC17.2■□□□□ 0.34
HERC6Q8IVU3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 AC120045.2-201ENST00000567334 178 ntBASIC17.2■□□□□ 0.34
HERC6Q8IVU3 RN7SL560P-201ENST00000577943 264 ntBASIC17.2■□□□□ 0.34
HERC6Q8IVU3 CLUHP6-201ENST00000580789 941 ntBASIC17.2■□□□□ 0.34
HERC6Q8IVU3 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HERC6Q8IVU3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 C1QBPP1-201ENST00000400117 770 ntBASIC17.19■□□□□ 0.34
HERC6Q8IVU3 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 TARDBPP1-201ENST00000442013 1203 ntBASIC17.19■□□□□ 0.34
HERC6Q8IVU3 AC012441.1-201ENST00000446669 685 ntBASIC17.19■□□□□ 0.34
HERC6Q8IVU3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 KRT8P37-201ENST00000451609 1420 ntBASIC17.19■□□□□ 0.34
HERC6Q8IVU3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 AC134312.5-201ENST00000568031 1313 ntBASIC17.19■□□□□ 0.34
HERC6Q8IVU3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HERC6Q8IVU3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 LINC01144-201ENST00000626198 1710 ntBASIC17.18■□□□□ 0.34
HERC6Q8IVU3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 CROCCP1-201ENST00000426910 5675 ntBASIC17.18■□□□□ 0.34
HERC6Q8IVU3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 ELK2AP-201ENST00000392510 1007 ntBASIC17.18■□□□□ 0.34
HERC6Q8IVU3 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 RHOQP1-201ENST00000555758 579 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms