Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 AL137013.1-201ENST00000432946 1228 ntBASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 LINC01238-205ENST00000567549 1107 ntBASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 AC083849.1-201ENST00000615227 514 ntBASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 AC092135.3-201ENST00000624151 1846 ntBASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 AC243591.1-201ENST00000452967 1364 ntBASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LYSMD2Q8IV50 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 AC089987.1-201ENST00000551654 2209 ntBASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 TP73-AS1-210ENST00000637775 1455 ntBASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 AC113347.1-201ENST00000413321 391 ntBASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 LINC00982-205ENST00000420957 435 ntBASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LYSMD2Q8IV50 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 AL645929.1-201ENST00000420084 975 ntBASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms