Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 AC010319.3-201ENST00000597028 470 ntBASIC16.95■□□□□ 0.3
RNF135Q8IUD6 MIR8072-201ENST00000614241 80 ntBASIC16.95■□□□□ 0.3
RNF135Q8IUD6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF135Q8IUD6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 AC018665.1-201ENST00000622927 1362 ntBASIC16.94■□□□□ 0.3
RNF135Q8IUD6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 KLF2P4-201ENST00000451959 1225 ntBASIC16.94■□□□□ 0.3
RNF135Q8IUD6 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 AC013467.2-201ENST00000605472 835 ntBASIC16.94■□□□□ 0.3
RNF135Q8IUD6 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 PDIA3P1-201ENST00000471856 1510 ntBASIC16.94■□□□□ 0.3
RNF135Q8IUD6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF135Q8IUD6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.93■□□□□ 0.3
RNF135Q8IUD6 AC108725.1-201ENST00000495472 409 ntBASIC16.93■□□□□ 0.3
RNF135Q8IUD6 USP32P1-208ENST00000506594 1164 ntBASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms