Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.71■□□□□ 0.75
COL23A1Q86Y22 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
COL23A1Q86Y22 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 SNX21-203ENST00000372541 771 ntTSL 2 BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 CFL1-214ENST00000534769 758 ntTSL 2 BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 IQSEC3P1-201ENST00000538799 536 ntBASIC19.7■□□□□ 0.74
COL23A1Q86Y22 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 MIR4750-201ENST00000584564 56 ntBASIC19.7■□□□□ 0.74
COL23A1Q86Y22 AL645939.5-201ENST00000606834 243 ntBASIC19.7■□□□□ 0.74
COL23A1Q86Y22 AP000346.4-201ENST00000614827 381 ntBASIC19.7■□□□□ 0.74
COL23A1Q86Y22 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL23A1Q86Y22 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 AC018470.1-201ENST00000624790 3129 ntBASIC19.69■□□□□ 0.74
COL23A1Q86Y22 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 CRCP-204ENST00000398684 492 ntTSL 2 BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 MSRA-203ENST00000441698 788 ntTSL 2 BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 NUP210P1-202ENST00000504322 710 ntBASIC19.69■□□□□ 0.74
COL23A1Q86Y22 AC022217.1-201ENST00000521069 738 ntBASIC19.69■□□□□ 0.74
COL23A1Q86Y22 AC024681.1-201ENST00000521917 487 ntBASIC19.69■□□□□ 0.74
COL23A1Q86Y22 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 AF254983.2-201ENST00000612331 135 ntBASIC19.69■□□□□ 0.74
COL23A1Q86Y22 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL23A1Q86Y22 NOC2LP2-201ENST00000407594 1944 ntBASIC19.68■□□□□ 0.74
COL23A1Q86Y22 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 AC148477.4-201ENST00000613430 1793 ntBASIC19.68■□□□□ 0.74
COL23A1Q86Y22 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 AC104784.1-201ENST00000473096 294 ntBASIC19.68■□□□□ 0.74
COL23A1Q86Y22 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 AL133373.2-201ENST00000623187 2828 ntBASIC19.68■□□□□ 0.74
COL23A1Q86Y22 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL23A1Q86Y22 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms