Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 POM121L10P-201ENST00000436994 1285 ntBASIC16.1■□□□□ 0.17
DENND4AQ7Z401 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 RPS2P36-201ENST00000456516 831 ntBASIC16.1■□□□□ 0.17
DENND4AQ7Z401 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.1■□□□□ 0.17
DENND4AQ7Z401 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 AL139384.1-201ENST00000612143 3047 ntBASIC16.1■□□□□ 0.17
DENND4AQ7Z401 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 AL662890.1-201ENST00000396818 632 ntBASIC16.1■□□□□ 0.17
DENND4AQ7Z401 AL354877.1-201ENST00000424412 413 ntBASIC16.1■□□□□ 0.17
DENND4AQ7Z401 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 TMEM198B-204ENST00000484016 896 ntBASIC16.1■□□□□ 0.17
DENND4AQ7Z401 AC044849.1-201ENST00000519737 1188 ntBASIC16.1■□□□□ 0.17
DENND4AQ7Z401 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 AP001505.2-201ENST00000616815 443 ntBASIC16.1■□□□□ 0.17
DENND4AQ7Z401 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DENND4AQ7Z401 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 AC006449.6-201ENST00000612330 2296 ntBASIC16.09■□□□□ 0.17
DENND4AQ7Z401 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DENND4AQ7Z401 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
DENND4AQ7Z401 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.08■□□□□ 0.17
DENND4AQ7Z401 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
DENND4AQ7Z401 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
DENND4AQ7Z401 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
DENND4AQ7Z401 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
DENND4AQ7Z401 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.17
DENND4AQ7Z401 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
DENND4AQ7Z401 AC022188.1-201ENST00000620960 1664 ntBASIC16.08■□□□□ 0.17
DENND4AQ7Z401 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
DENND4AQ7Z401 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
DENND4AQ7Z401 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
DENND4AQ7Z401 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.17
DENND4AQ7Z401 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
DENND4AQ7Z401 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.08■□□□□ 0.17
DENND4AQ7Z401 KLF2P2-201ENST00000416807 1039 ntBASIC16.08■□□□□ 0.17
DENND4AQ7Z401 POM121L8P-201ENST00000417732 1281 ntBASIC16.08■□□□□ 0.17
DENND4AQ7Z401 POM121L9P-203ENST00000441984 1285 ntBASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms