Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 AC124067.4-201ENST00000519691 2379 ntBASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 MIR1908-201ENST00000410394 80 ntBASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 ACTG1P3-201ENST00000431775 1114 ntBASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 SLED1-202ENST00000512051 380 ntBASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 BRI3BPP1-201ENST00000594224 787 ntBASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 AL450472.2-201ENST00000603663 1156 ntBASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 MIR6869-201ENST00000619434 62 ntBASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 GPR182-203ENST00000622922 591 ntBASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 AC093525.8-201ENST00000624099 1342 ntBASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC149Q6ZUS6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 ENPP7P5-201ENST00000541031 1031 ntBASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCDC149Q6ZUS6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
CCDC149Q6ZUS6 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms