Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC23.36■■□□□ 1.33
CCDC141Q6ZP82 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC23.35■■□□□ 1.33
CCDC141Q6ZP82 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC141Q6ZP82 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC141Q6ZP82 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC23.35■■□□□ 1.33
CCDC141Q6ZP82 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC141Q6ZP82 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC141Q6ZP82 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC141Q6ZP82 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC141Q6ZP82 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC141Q6ZP82 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC141Q6ZP82 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC23.35■■□□□ 1.33
CCDC141Q6ZP82 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC141Q6ZP82 AC004898.1-201ENST00000451057 766 ntBASIC23.35■■□□□ 1.33
CCDC141Q6ZP82 HOMER2P2-201ENST00000451621 847 ntBASIC23.35■■□□□ 1.33
CCDC141Q6ZP82 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC23.35■■□□□ 1.33
CCDC141Q6ZP82 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC23.35■■□□□ 1.33
CCDC141Q6ZP82 RHOQP1-201ENST00000555758 579 ntBASIC23.35■■□□□ 1.33
CCDC141Q6ZP82 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC23.35■■□□□ 1.33
CCDC141Q6ZP82 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC23.35■■□□□ 1.33
CCDC141Q6ZP82 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC141Q6ZP82 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC141Q6ZP82 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CCDC141Q6ZP82 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
CCDC141Q6ZP82 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC23.35■■□□□ 1.33
CCDC141Q6ZP82 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC141Q6ZP82 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC23.34■■□□□ 1.33
CCDC141Q6ZP82 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CCDC141Q6ZP82 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC141Q6ZP82 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
CCDC141Q6ZP82 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC141Q6ZP82 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC141Q6ZP82 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC23.34■■□□□ 1.33
CCDC141Q6ZP82 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC23.34■■□□□ 1.33
CCDC141Q6ZP82 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC141Q6ZP82 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC141Q6ZP82 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC23.34■■□□□ 1.33
CCDC141Q6ZP82 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CCDC141Q6ZP82 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC23.34■■□□□ 1.33
CCDC141Q6ZP82 SCARNA20.5-201ENST00000516991 142 ntBASIC23.34■■□□□ 1.33
CCDC141Q6ZP82 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC23.34■■□□□ 1.33
CCDC141Q6ZP82 AP001258.2-201ENST00000529891 490 ntBASIC23.34■■□□□ 1.33
CCDC141Q6ZP82 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC141Q6ZP82 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC23.34■■□□□ 1.33
CCDC141Q6ZP82 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC23.34■■□□□ 1.33
CCDC141Q6ZP82 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC23.34■■□□□ 1.33
CCDC141Q6ZP82 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC23.34■■□□□ 1.33
CCDC141Q6ZP82 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC141Q6ZP82 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC141Q6ZP82 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCDC141Q6ZP82 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC141Q6ZP82 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
CCDC141Q6ZP82 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
CCDC141Q6ZP82 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC141Q6ZP82 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
CCDC141Q6ZP82 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC141Q6ZP82 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC141Q6ZP82 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC141Q6ZP82 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC141Q6ZP82 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
CCDC141Q6ZP82 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC141Q6ZP82 MIR663B-201ENST00000408361 115 ntBASIC23.33■■□□□ 1.33
CCDC141Q6ZP82 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC23.33■■□□□ 1.33
CCDC141Q6ZP82 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
CCDC141Q6ZP82 RNA5SP423-201ENST00000517127 109 ntBASIC23.33■■□□□ 1.33
CCDC141Q6ZP82 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCDC141Q6ZP82 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC23.33■■□□□ 1.33
CCDC141Q6ZP82 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
CCDC141Q6ZP82 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
CCDC141Q6ZP82 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC23.33■■□□□ 1.33
CCDC141Q6ZP82 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
CCDC141Q6ZP82 AL354989.2-201ENST00000435838 1540 ntBASIC23.33■■□□□ 1.33
CCDC141Q6ZP82 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC23.33■■□□□ 1.33
CCDC141Q6ZP82 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
CCDC141Q6ZP82 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC23.33■■□□□ 1.32
CCDC141Q6ZP82 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC141Q6ZP82 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
CCDC141Q6ZP82 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC141Q6ZP82 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC141Q6ZP82 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC23.32■■□□□ 1.32
CCDC141Q6ZP82 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
CCDC141Q6ZP82 AP003171.2-201ENST00000528208 925 ntBASIC23.32■■□□□ 1.32
CCDC141Q6ZP82 ACTG1P17-201ENST00000558391 1119 ntBASIC23.32■■□□□ 1.32
CCDC141Q6ZP82 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC23.32■■□□□ 1.32
CCDC141Q6ZP82 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC23.32■■□□□ 1.32
CCDC141Q6ZP82 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC23.32■■□□□ 1.32
CCDC141Q6ZP82 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC141Q6ZP82 AC015818.8-201ENST00000587907 1519 ntBASIC23.32■■□□□ 1.32
CCDC141Q6ZP82 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC141Q6ZP82 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC23.32■■□□□ 1.32
CCDC141Q6ZP82 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC23.32■■□□□ 1.32
CCDC141Q6ZP82 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC141Q6ZP82 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
CCDC141Q6ZP82 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC141Q6ZP82 KRT8P14-201ENST00000414254 1442 ntBASIC23.32■■□□□ 1.32
CCDC141Q6ZP82 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC23.32■■□□□ 1.32
CCDC141Q6ZP82 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC141Q6ZP82 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCDC141Q6ZP82 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
CCDC141Q6ZP82 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms