Protein–RNA interactions for Protein: Q6UXM1

LRIG3, Leucine-rich repeats and immunoglobulin-like domains protein 3, humanhuman

Predictions only

Length 1,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG3Q6UXM1 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 RNU1-129P-201ENST00000384064 167 ntBASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 ATP5G2P1-201ENST00000433580 426 ntBASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 AP002469.2-201ENST00000531724 424 ntBASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 U1.21-201ENST00000580816 167 ntBASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 MIR4321-201ENST00000592276 80 ntBASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 NPAP1P7-201ENST00000613027 823 ntBASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 GGTLC5P-201ENST00000617623 998 ntBASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRIG3Q6UXM1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 FAM8A3P-201ENST00000427218 844 ntBASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 AL645939.2-201ENST00000427340 991 ntBASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 AC006504.4-201ENST00000592118 1568 ntBASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRIG3Q6UXM1 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRIG3Q6UXM1 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRIG3Q6UXM1 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LRIG3Q6UXM1 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRIG3Q6UXM1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIG3Q6UXM1 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
LRIG3Q6UXM1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.28■□□□□ 0.2
LRIG3Q6UXM1 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIG3Q6UXM1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.28■□□□□ 0.2
LRIG3Q6UXM1 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIG3Q6UXM1 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
LRIG3Q6UXM1 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIG3Q6UXM1 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.28■□□□□ 0.2
LRIG3Q6UXM1 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIG3Q6UXM1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRIG3Q6UXM1 ELK2BP-201ENST00000415014 1224 ntBASIC16.28■□□□□ 0.2
LRIG3Q6UXM1 NUS1P2-201ENST00000417358 873 ntBASIC16.28■□□□□ 0.2
LRIG3Q6UXM1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRIG3Q6UXM1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms