Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 AC093724.1-201ENST00000448659 1027 ntBASIC14.58□□□□□ -0.08
NIPAL3Q6P499 AC079140.1-201ENST00000508039 487 ntBASIC14.58□□□□□ -0.08
NIPAL3Q6P499 YBX1P5-201ENST00000509441 847 ntBASIC14.58□□□□□ -0.08
NIPAL3Q6P499 IGHV3-62-201ENST00000520057 340 ntBASIC14.58□□□□□ -0.08
NIPAL3Q6P499 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 AC027307.2-201ENST00000591252 911 ntBASIC14.58□□□□□ -0.08
NIPAL3Q6P499 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.58□□□□□ -0.08
NIPAL3Q6P499 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 AC211486.1-202ENST00000416371 468 ntBASIC14.57□□□□□ -0.08
NIPAL3Q6P499 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 AC211476.1-201ENST00000503899 468 ntBASIC14.57□□□□□ -0.08
NIPAL3Q6P499 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 AC243562.1-201ENST00000560672 389 ntBASIC14.57□□□□□ -0.08
NIPAL3Q6P499 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 AL138918.1-201ENST00000568306 659 ntBASIC14.57□□□□□ -0.08
NIPAL3Q6P499 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 AC023511.2-201ENST00000618803 211 ntBASIC14.57□□□□□ -0.08
NIPAL3Q6P499 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 AC006486.2-201ENST00000624246 2199 ntBASIC14.57□□□□□ -0.08
NIPAL3Q6P499 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NIPAL3Q6P499 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms