Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 AC145285.3-201ENST00000564603 959 ntBASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 AP003680.1-201ENST00000598970 3660 ntBASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
TMEM53Q6P2H8 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TMEM53Q6P2H8 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.74□□□□□ -0.05
TMEM53Q6P2H8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms